RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SMIM7Q9BQ49 75 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TMEM134Q9H6X4 195 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 A0A1W2PPQ1 181 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR2M5A3KFT3 312 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CEBPZOSA8MTT3 80 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 H3BVH4 76 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TYROBPO43914 113 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NQO2P16083 231 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TNFSF8P32971 234 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 GPR4P46093 362 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CLCNKAP51800 687 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 PLP1P60201 277 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 KCNC3Q14003 757 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SLBPQ14493 270 aaKnown RBP eCLIP5.79□□□□□ -1.48
VCAN-203ENST00000343200 C12orf29Q8N999 325 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NECAP1Q8NC96 275 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR2M3Q8NG83 312 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR2T27Q8NH04 317 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ZCCHC14Q8WYQ9 949 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 TMEM175Q9BSA9 504 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 HINT2Q9BX68 163 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NIFKQ9BYG3 293 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 NXF2Q9GZY0 626 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 OSGIN1Q9UJX0 560 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TRAPPC1Q9Y5R8 145 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SLIT3O75094 1523 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 G3V3Y1 287 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 GRM6O15303 877 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CSF3P09919 207 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SPATA31C1P0DKV0 1188 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TMEM11P17152 192 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ZNF133P52736 654 aaPredicted RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 BRAT1Q6PJG6 821 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ZFAND4Q86XD8 727 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SLC35F2Q8IXU6 374 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CELF2-AS1Q8N7Q2 184 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ZFP41Q8N8Y5 198 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SRMSQ9H3Y6 488 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 FAM206AQ9NX38 181 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 PGAP2Q9UHJ9 254 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 FBXL2Q9UKC9 423 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ARHGAP23Q9P227 1491 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR51F1A6NGY5 319 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 RTCAO00442 366 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 EBLN1P0CF75 366 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 IRF2P14316 349 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 BAXQ07812 192 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 RPUSD3Q6P087 351 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 B3GNT8Q7Z7M8 397 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 WDR20Q8TBZ3 569 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 DYNC2LI1Q8TCX1 351 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TEPSINQ96N21 525 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NKX3-1Q99801 234 aaPredicted RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 CTRCQ99895 268 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 HCAR1Q9BXC0 346 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CSNK1G1Q9HCP0 422 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 THSD1Q9NS62 852 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ACSS1Q9NUB1 689 aaPredicted RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR1A1Q9P1Q5 309 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 DIP2CQ9Y2E4 1556 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 BMI1P35226 326 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OXA1LQ15070 435 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SHEQ5VZ18 495 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 HHIPL2Q6UWX4 724 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OTOP1Q7RTM1 612 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 PRSS42Q7Z5A4 293 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 AMZ2Q86W34 360 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR51F2Q8NH61 342 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NANOS1Q8WY41 292 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 PGAM5Q96HS1 289 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 HAO2Q9NYQ3 351 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CPA4Q9UI42 421 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NFS1Q9Y697 457 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TMEM218A2RU14 115 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 YDJCA8MPS7 323 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 B4GALT5O43286 388 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SPATA31D3P0C874 917 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 GRPRP30550 384 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SDHAP31040 664 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 HOXA11P31270 313 aaPredicted RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 RPS18P62269 152 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 FAM98CQ17RN3 349 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 CTSL3PQ5NE16 218 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 METTL7BQ6UX53 244 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SPATA31D4Q6ZUB0 917 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 KRTCAP2Q8N6L1 136 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SLC16A10Q8TF71 515 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NRG4Q8WWG1 115 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TAAR9Q96RI9 348 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 KIAA1522Q9P206 1035 aaPredicted RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 RHCGQ9UBD6 479 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SRPK3Q9UPE1 567 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TRABD2BA6NFA1 517 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 A6NJY4 79 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 GABRR3A8MPY1 467 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 E5RGE8 158 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 NME2P1O60361 137 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 DLX3O60479 287 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms