RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NUDT22Q9BRQ3 303 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 INSL6Q9Y581 213 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 AP1G1O43747 822 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 HLCSP50747 726 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 SELPLGQ14242 412 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 DESI1Q6ICB0 168 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 NLE1Q9NVX2 485 aaPredicted RBP16.55■□□□□ 0.24
SMAD4-201ENST00000342988 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 A0A1W2PRU2 124 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ACP2P11117 423 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 PLAC9Q5JTB6 97 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 KCTD12Q96CX2 325 aaKnown RBP16.55■□□□□ 0.24
SMAD4-201ENST00000342988 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ANHXE9PGG2 379 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 IGHEP01854 428 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 TACR1P25103 407 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 CD1CP29017 333 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 RAB40BQ12829 278 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ESAMQ96AP7 390 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
SMAD4-201ENST00000342988 NIT2Q9NQR4 276 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
SMAD4-201ENST00000342988 LTB4RQ15722 352 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 OR52N2Q8NGI0 321 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 DBF4BQ8NFT6 615 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 METTL9Q9H1A3 318 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ERVMER34-1Q9H9K5 563 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 SEMA4GQ9NTN9 838 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ETV7Q9Y603 341 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 M0R3H8 397 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ACRV1P26436 265 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 DGAT2L6Q6ZPD8 337 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 CDC20BQ86Y33 519 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 OR13C4Q8NGS5 318 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 URGCP-MRPS24S4R325 110 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 GALNT1Q10472 559 aaPredicted RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF678Q5SXM1 525 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 FAM122BQ7Z309 247 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF454Q8N9F8 522 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 UCK1Q9HA47 277 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SIAEQ9HAT2 523 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 DIP2AQ14689 1571 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF626Q68DY1 528 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 KCTD11Q693B1 232 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 OR2T11Q8NH01 316 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ABHD6Q9BV23 337 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 FAM159BA6NKW6 160 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 JAM2P57087 298 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 Q6ZVU0 165 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 PIGCQ92535 297 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 TAF9BQ9HBM6 251 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 UNC50Q53HI1 259 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 EGLN1Q9GZT9 426 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SUOXP51687 545 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 NFATC3Q12968 1075 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SFT2D3Q587I9 215 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 LMNTD1Q8N9Z9 388 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SECTM1Q8WVN6 248 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 KIRREL1Q96J84 757 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 LIN28AQ9H9Z2 209 aaKnown RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SLC2A6Q9UGQ3 507 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ZGRF1Q86YA3 2104 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 MMP7P09237 267 aaPredicted RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SLC36A2Q495M3 483 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 PLAG1Q6DJT9 500 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 EIF4E3Q8N5X7 224 aaKnown RBP16.54■□□□□ 0.24
SMAD4-201ENST00000342988 RAB3CQ96E17 227 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 DNAJA3Q96EY1 480 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 MED30Q96HR3 178 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 IKZF5Q9H5V7 419 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 GLCEO94923 617 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ICAM2P13598 275 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 C6orf89Q6UWU4 347 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 LRRTM1Q86UE6 522 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 OR10J5Q8NHC4 309 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 ADAMTS16Q8TE57 1224 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 SMOC2Q9H3U7 446 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 TMEM98Q9Y2Y6 226 aa16.54■□□□□ 0.24
SMAD4-201ENST00000342988 PTPRMP28827 1452 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 RABIFP47224 123 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 SIMC1Q8NDZ2 872 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 UBALD1Q8TB05 177 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 NECAP2Q9NVZ3 263 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 K7ERQ8 282 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 CRXO43186 299 aaPredicted RBP16.53■□□□□ 0.24
SMAD4-201ENST00000342988 SIAH2O43255 324 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 STC2O76061 302 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 IKZF1Q13422 519 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 EARS2Q5JPH6 523 aaKnown RBP16.53■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF765Q7L2R6 523 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 HLA-CQ95604 372 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms