RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ABRACLQ9P1F3 81 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 MRPS33Q9Y291 106 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 ADAM18Q9Y3Q7 739 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 BLACEA4D250 179 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 CTNSO60931 367 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 GATBO75879 557 aaKnown RBP13.35□□□□□ -0.27
TDP2-201ENST00000341060 UBL3O95164 117 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 CT45A8P0DMV1 189 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 CT45A9P0DMV2 189 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 NAA10P41227 235 aaPredicted RBP13.35□□□□□ -0.27
TDP2-201ENST00000341060 GPR3P46089 330 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 MMP15P51511 669 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 RPS11P62280 158 aaKnown RBP eCLIP13.35□□□□□ -0.27
TDP2-201ENST00000341060 SKP1P63208 163 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 PRTGQ2VWP7 1150 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 SLC36A2Q495M3 483 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 CCDC58Q4VC31 144 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 SNAP47Q5SQN1 464 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 RPL22L1Q6P5R6 122 aaKnown RBP13.35□□□□□ -0.27
TDP2-201ENST00000341060 DPY19L2P2Q6ZN68 376 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 KRT74Q7RTS7 529 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 LRRC17Q8N6Y2 441 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 AVL9Q8NBF6 648 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 OR51L1Q8NGJ5 315 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 OR5H6Q8NGV6 325 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 SNX33Q8WV41 574 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
TDP2-201ENST00000341060 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 MAGEB4O15481 346 aaPredicted RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 FLRT2O43155 660 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 PPM1BO75688 479 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 CDC123O75794 336 aaPredicted RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 CSTAP01040 98 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 LGALS3BPQ08380 585 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 PON3Q15166 354 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 NTRK2Q16620 822 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 CEP78Q5JTW2 689 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 ZNF595Q8IYB9 648 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 FRMD1Q8N878 549 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 HMGB4Q8WW32 186 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 HSD17B8Q92506 261 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 YIPF5Q969M3 257 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 NRIP3Q9NQ35 241 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 A0A0A6YYJ9 748 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 TRBV2A0A0J9YWF9 115 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 LRRN3E7EW58 273 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 ARPC3O15145 178 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 CPNE3O75131 537 aaKnown RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 RPL4P36578 427 aaKnown RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 SRP9P49458 86 aaKnown RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 DIO1P49895 249 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 RPS4XP62701 263 aaKnown RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 FZD2Q14332 565 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 ZNF267Q14586 743 aaPredicted RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 ISXQ2M1V0 245 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 SLC35D3Q5M8T2 416 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 MCATQ8IVS2 390 aaKnown RBP13.34□□□□□ -0.27
TDP2-201ENST00000341060 SLITRK4Q8IW52 837 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 DDOQ99489 341 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 LRRN3Q9H3W5 708 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 NUDT15Q9NV35 164 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 LRIT1Q9P2V4 623 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 GNG8Q9UK08 70 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 MMP17Q9ULZ9 603 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 ZNF337Q9Y3M9 751 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 A0A0C4DFX4 3053 aa13.34□□□□□ -0.27
TDP2-201ENST00000341060 A0A1W2PPK0 400 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 C7orf66A4D0T2 115 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ZNF780AO75290 641 aaPredicted RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 DHFRP00374 187 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 CTSEP14091 401 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SNRPBP14678 240 aaKnown RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 PITPNAQ00169 270 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 NNATQ16517 81 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 BCL2L15Q5TBC7 163 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OVCH1Q7RTY7 1134 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 BCORP1Q8N888 145 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR4D9Q8NGE8 314 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR4C3Q8NH37 302 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ADAMTS18Q8TE60 1221 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ZDHHC1Q8WTX9 485 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ZNRF4Q8WWF5 429 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SCMH1Q96GD3 660 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ZNF578Q96N58 590 aaPredicted RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR14A2Q96R54 314 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms