RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C20orf204Q6ZNR8 217 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 PIGWQ7Z7B1 504 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF100Q8IYN0 542 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 DPP10Q8N608 796 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 KISS1RQ969F8 398 aaPredicted RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 MAL2Q969L2 176 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZC3HAV1LQ96H79 300 aaKnown RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF607Q96SK3 696 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 OR11A1Q9GZK7 315 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 PIF1Q9H611 641 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 EVA1AQ9H8M9 152 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 BEX4Q9NWD9 120 aaPredicted RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 VAPAQ9P0L0 249 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 NDUFAF1Q9Y375 327 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 A0A0G2JND7 137 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 PRORSD1PA6NEY8 169 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF716A6NP11 495 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 A8MVM7 634 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF814B7Z6K7 855 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 DNAJC8O75937 253 aaPredicted RBP11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 GPIP06744 558 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 THBDP07204 575 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 GKN3PP0CG01 181 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 TROVE2P10155 538 aaKnown RBP eCLIP11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLC6A2P23975 617 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 IDUAP35475 653 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCDC121Q6ZUS5 278 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 CLIP4Q8N3C7 705 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 CADM2Q8N3J6 435 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 PIGTQ969N2 578 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 APH1AQ96BI3 265 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 S100PBPQ96BU1 408 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 PIP5K1AQ99755 562 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 C12orf10Q9HB07 376 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 PARPBPQ9NWS1 579 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLAMF8Q9P0V8 285 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLC9A8Q9Y2E8 581 aa11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 NOSIPQ9Y314 301 aaKnown RBP11.82□□□□□ -0.52
SIRPB3P-201ENST00000340424 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 A0A1W2PPR1 153 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 TMCC2O75069 709 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 MRPL33O75394 65 aaKnown RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 SERPINB7O75635 380 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 ADAP00813 363 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 CD53P19397 219 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCNA2P20248 432 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 COX5AP20674 150 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 RBBP4Q09028 425 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 ACKR1Q16570 336 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 RUNDC3AQ59EK9 446 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 C1QTNF12Q5T7M4 302 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 DHRS4L2Q6PKH6 230 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 DLEU7Q6UYE1 221 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 SERPINA11Q86U17 422 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLC30A8Q8IWU4 369 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 HIPK4Q8NE63 616 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 NFKBIDQ8NI38 313 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 STK35Q8TDR2 534 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 CPPED1Q9BRF8 314 aaPredicted RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 TAPBPLQ9BX59 468 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANGPT4Q9Y264 503 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 CHST2Q9Y4C5 530 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
SIRPB3P-201ENST00000340424 VPS13CQ709C8 3753 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 ITPR3Q14573 2671 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 KLF4O43474 513 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 VAMP5O95183 116 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 IMPDH2P12268 514 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 SCARB2Q14108 478 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 COQ5Q5HYK3 327 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 TIMM23BQ5SRD1 257 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 ATG4DQ86TL0 474 aaPredicted RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 WFDC8Q8IUA0 241 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 TGIF2LYQ8IUE0 185 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 LSMEM1Q8N8F7 131 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 C11orf65Q8NCR3 313 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCDC197Q8NCU1 140 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 C3orf49Q96BT1 292 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 THOC1Q96FV9 657 aaKnown RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANKRD27Q96NW4 1050 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 CGREF1Q99674 301 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms