RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 NPRL3Q12980 569 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF74Q16587 644 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 TTC23Q5W5X9 447 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 YRDCQ86U90 279 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 OAFQ86UD1 273 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 C10orf53Q8N6V4 93 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 OSTF1Q92882 214 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 KTI12Q96EK9 354 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 NPAS1Q99742 590 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 NDEL1Q9GZM8 345 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 TP53TG5Q9Y2B4 290 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF337Q9Y3M9 751 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
NIPAL3-202ENST00000339255 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 SHISA8B8ZZ34 492 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 TFECO14948 347 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 MITFO75030 526 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 RCBTB2O95199 551 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 WISP1O95388 367 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 CH25HO95992 272 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 TFPIP10646 304 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 IDUAP35475 653 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 CAPGP40121 348 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 RPS5P46782 204 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 ZNF620Q6ZNG0 422 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 MAMDC2Q7Z304 686 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 RBMXL3Q8N7X1 1067 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 MBOAT4Q96T53 435 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 GPA33Q99795 319 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 OR11A1Q9GZK7 315 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 RIBC2Q9H4K1 309 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 IL20Q9NYY1 176 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 LRRC42Q9Y546 428 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
NIPAL3-202ENST00000339255 DSPP15924 2871 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 H3BML4 177 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 H3BN98 237 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC16A6O15403 523 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 EFNA2O43921 213 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FZD7O75084 574 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 HIST1H2ABP04908 130 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 ASAH2BP0C7U1 165 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FUT1P19526 365 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 GFRA1P56159 465 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 RPS4XP62701 263 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FOXK1P85037 733 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FOXK2Q01167 660 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 IL18R1Q13478 541 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 HIST3H2AQ7L7L0 130 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC46A3Q7Z3Q1 461 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 SCAIQ8N9R8 606 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 OR5M1Q8NGP8 315 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 HIST1H2ACQ93077 130 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 TAAR8Q969N4 342 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 TAPBPLQ9BX59 468 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 PRORYQ9H606 182 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM118AQ9NWS6 357 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 TRAPPC4Q9Y296 219 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 LAMA5O15230 3695 aa13.1□□□□□ -0.31
NIPAL3-202ENST00000339255 ACTL6AO96019 429 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 BGLAPP02818 100 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 FAM87AP0C7U9 286 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 PEPDP12955 493 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 IL11P20809 199 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 GTF2E2P29084 291 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 CRISP1P54107 249 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 PRPS1P60891 318 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 MYBPHQ13203 477 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 KEAP1Q14145 624 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 SMARCD3Q6STE5 483 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 OR52L1Q8NGH7 329 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 PNPLA2Q96AD5 504 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 MOGAT1Q96PD6 335 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms