RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GP1BBP13224 206 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 INSM1Q01101 510 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 ZNF791Q3KP31 576 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 ARHGAP11AQ6P4F7 1023 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 HGDQ93099 445 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 CCNL2Q96S94 520 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 TEAD3Q99594 435 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 NPAS1Q99742 590 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 KATNB1Q9BVA0 655 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 PISDQ9UG56 409 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 BAIAP2Q9UQB8 552 aa20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 EXOSC1Q9Y3B2 195 aaKnown RBP20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 SPIN1Q9Y657 262 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-203ENST00000339162 C4orf47A7E2U8 309 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 B4E171 279 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 GPX5O75715 221 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 TSPAN7P41732 249 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 RPS4XP62701 263 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 C19orf48Q6RUI8 117 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 RAB11FIP2Q7L804 512 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 OR51L1Q8NGJ5 315 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 OR8K3Q8NH51 312 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 RASD2Q96D21 266 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 TMCO6Q96DC7 493 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 HRH3Q9Y5N1 445 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 HS3ST3B1Q9Y662 390 aa20.39■□□□□ 0.85
PDLIM2-203ENST00000339162 IGHV1-45A0A0A0MS14 117 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 RPS18P62269 152 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 SPEM2Q0P670 501 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 ZFP41Q8N8Y5 198 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 OR10G3Q8NGC4 313 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNF649Q9BS31 505 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 EDEM2Q9BV94 578 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 RERGLQ9H628 205 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 EXOSC4Q9NPD3 245 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 MED11Q9P086 117 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 LOC102723996A0A087X1L8 192 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 TMEM129A0AVI4 362 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 CCDC182A6NF36 153 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 CBFA2T3O75081 653 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 F13BP05160 661 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 MLLT11Q13015 90 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 DPY19L2P2Q6ZN68 376 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 PHC2Q8IXK0 858 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 TMEM99Q8N816 258 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 OR2Y1Q8NGV0 311 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 ZPLD1Q8TCW7 415 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 ELP5Q8TE02 316 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 TMEM203Q969S6 136 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 NMNAT3Q96T66 252 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 ERVK13-1Q9NX77 482 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 TAS2R10Q9NYW0 307 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 KLRF1Q9NZS2 232 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 SEC14L4Q9UDX3 406 aa20.38■□□□□ 0.85
PDLIM2-203ENST00000339162 LALBAP00709 142 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 IFNGP01579 166 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 COX6A1P12074 109 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 PSPHP78330 225 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 LYPD8Q6UX82 237 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 ADCK1Q86TW2 530 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 TRMT61AQ96FX7 289 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 RACGAP1Q9H0H5 632 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 NRIP3Q9NQ35 241 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 C12orf71A8MTZ7 269 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 J3QRE1 110 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 GALR2O43603 387 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 IGHA1P01876 353 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 ASAH2BP0C7U1 165 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNF806P0C7X5 589 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 ENDOUP21128 410 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC2A5P22732 501 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 LIMK1P53667 647 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 DGUOKQ16854 277 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 ADGRG3Q86Y34 549 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 RASL10BQ96S79 203 aa20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 YARS2Q9Y2Z4 477 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-203ENST00000339162 EXPH5Q8NEV8 1989 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 TMED7-TICAM2A0A0A6YYA0 188 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 SUSD5O60279 629 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 BMXP51813 675 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 PRPS1P60891 318 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 INPP5JQ15735 1006 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 ISXQ2M1V0 245 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 TIPARPQ7Z3E1 657 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC25A36Q96CQ1 311 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 Q96M85 177 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 STRADBQ9C0K7 418 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 OR11A1Q9GZK7 315 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 C12orf10Q9HB07 376 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 VDAC3Q9Y277 283 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 HIF3AQ9Y2N7 669 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 TMED7Q9Y3B3 224 aa20.36■□□□□ 0.85
PDLIM2-203ENST00000339162 TMEM72A0PK05 275 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC22A31A6NKX4 558 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC25A12O75746 678 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 TSPAN19P0C672 248 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SERPINB10P48595 397 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 C17orf67Q0P5P2 114 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ALG10Q5BKT4 473 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms