RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PGGHGQ32M88 737 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GXYLT1Q4G148 440 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 C1orf140Q5VVS0 124 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR2T33Q8NG76 320 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 STK35Q8TDR2 534 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 UBQLN3Q9H347 655 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PRKYO43930 277 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MPZL2O60487 215 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CBR3O75828 277 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 BGLAPP02818 100 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SMIM18P0DKX4 95 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HK1P19367 917 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PCYT1AP49585 367 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MLLT10P55197 1068 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DSCR4P56555 118 aaPredicted RBP13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TOP3AQ13472 1001 aaPredicted RBP13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TSPAN14Q8NG11 270 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TRUB1Q8WWH5 349 aaKnown RBP13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LIPHQ8WWY8 451 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IFT27Q9BW83 186 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HES7Q9BYE0 225 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DKKL1Q9UK85 242 aa13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.27
CDK5RAP3-201ENST00000338399 A0A087WZY1 265 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR5H15A6NDH6 313 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BHLHE40O14503 412 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NDUFB2O95178 105 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 EIF1P41567 113 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CXCR4P61073 352 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MFAP5Q13361 173 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BLMHQ13867 455 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FDCSPQ8NFU4 85 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR8J1Q8NGP2 316 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZNF566Q969W8 418 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZBTB8AQ96BR9 441 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC38A2Q96QD8 506 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TRIM64A6NGJ6 449 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 LRRC3CA6NJW4 275 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 H3BML4 177 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZNF208O43345 1280 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZIC3O60481 467 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FAM20BO75063 409 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 AHSA1O95433 338 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC6A6P31641 620 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RPS4XP62701 263 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 EFNB1P98172 346 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TOMM20Q15388 145 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FAM69AQ5T7M9 428 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 C5orf46Q6UWT4 87 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 IGFN1Q86VF2 1251 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SGCDQ92629 289 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 DDIT4LQ96D03 193 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ARL5BQ96KC2 179 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 UBL7Q96S82 380 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FKRPQ9H9S5 495 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SERINC1Q9NRX5 453 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CLN6Q9NWW5 311 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GPR52Q9Y2T5 361 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MCIDASD6RGH6 385 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SURF4O15260 269 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC2A10O95528 541 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OPN1LWP04000 364 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HIST1H2ABP04908 130 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HMGN1P05114 100 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RFPL3SP0C7P2 107 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TFPIP10646 304 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PEPDP12955 493 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ADH6P28332 368 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 AQP2P41181 271 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NUDT6P53370 316 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ARG2P78540 354 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC35F1Q5T1Q4 408 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HIST3H2AQ7L7L0 130 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BCDIN3DQ7Z5W3 292 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SULF2Q8IWU5 870 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GTPBP8Q8N3Z3 284 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms