RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TOMM40LQ969M1 308 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SFXN2Q96NB2 322 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RAB22AQ9UL26 194 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 NDRG2Q9UN36 371 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 KIR2DS1A0A191URI9 304 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ADH4P08319 380 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GPX3P22352 226 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CCKARP32238 428 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 KIR2DS4P43632 304 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SLC11A1P49279 550 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 KIR2DS1Q14954 304 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TIGITQ495A1 244 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MBOAT2Q6ZWT7 520 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 IGDCC3Q8IVU1 814 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 BPIFB2Q8N4F0 458 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MTMR14Q8NCE2 650 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PDE7BQ9NP56 450 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 POP7O75817 140 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 H2AFB1P0C5Y9 115 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 FPR3P25089 353 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MEOX2P50222 304 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RPS21P63220 83 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CLINT1Q14677 625 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 NLRC3Q7RTR2 1065 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CISD2Q8N5K1 135 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 OR7D2Q96RA2 312 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CXXC1Q9P0U4 656 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 A0A0A6YYJ9 748 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 OTOL1A6NHN0 477 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GABRA3P34903 492 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 APLNRP35414 380 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 FCN2Q15485 313 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TEX261Q6UWH6 196 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CPOQ8IVL8 374 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CADM3Q8N126 398 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 FAM174AQ8TBP5 190 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 C11orf84Q9BUA3 381 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 U3KQ87 197 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RREB1Q92766 1687 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MPPED1O15442 326 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CST3P01034 146 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TAS2R45P59539 299 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ARL16Q0P5N6 197 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CST9LP1Q5W188 147 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF610Q8N9Z0 462 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CIB3Q96Q77 187 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM43Q9BTV4 400 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 HES2Q9Y543 173 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ANKRD30BLA7E2S9 258 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 C4orf47A7E2U8 309 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 C11orf98E9PRG8 122 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EPHA1P21709 976 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 KCNJ3P48549 501 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 RAB7AP51149 207 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 FOXK1P85037 733 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 MEF2AQ02078 507 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF100Q8IYN0 542 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR6M1Q8NGM8 313 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 DYNC2LI1Q8TCX1 351 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TMIGD2Q96BF3 282 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 GABARAPL3Q9BY60 117 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM38AQ9H6F2 299 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TRAPPC4Q9Y296 219 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TOPAZ1Q8N9V7 1692 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 FAM221BA6H8Z2 402 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ENPP3O14638 875 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 CLDN7O95471 211 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 IL3RAP26951 378 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 UBE2G1P62253 170 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 STPG2Q8N412 459 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 MIR1-1HGQ9H1L0 117 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 A4GALTQ9NPC4 353 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TFAP2AP05549 437 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PFKMP08237 780 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM225BP0DP42 221 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 HOXD11P31277 338 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 DUSP3P51452 185 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EPHA5P54756 1037 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PLGLAQ15195 96 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ADPRMQ3LIE5 342 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 NHSL2Q5HYW2 709 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EOGTQ5NDL2 527 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SIGIRRQ6IA17 410 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR4K13Q8NH42 304 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR4A16Q8NH70 328 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 RAB8BQ92930 207 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SLC46A1Q96NT5 459 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 WDR76Q9H967 626 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TM7SF3Q9NS93 570 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 IGKV6D-41A0A0C4DH26 115 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PEX12O00623 359 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ADAM11O75078 769 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 AGTR2P50052 363 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 HNRNPKP61978 463 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SIRPAP78324 504 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SLC14A1Q13336 389 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 MRPL21Q7Z2W9 205 aaKnown RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 LGI3Q8N145 548 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 BORCS6Q96GS4 357 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 WDR77Q9BQA1 342 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms