RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SYNGR4O95473 234 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SERPINA5P05154 406 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RBMY1DP0C7P1 496 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM253P0C7T8 217 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 IGHV1-8P0DP01 117 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 H2AFXP16104 143 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 AK4P27144 223 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 GNA15P30679 374 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 UQCRC1P31930 480 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ARL1P40616 181 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TGM4P49221 684 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 FABP6P51161 128 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CASP5P51878 434 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NAAAQ02083 359 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 BSPH1Q075Z2 132 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CSTF3Q12996 717 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 AQP6Q13520 282 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SPARCL1Q14515 664 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NR1I3Q14994 352 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PCK2Q16822 640 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 LRRC75BQ2VPJ9 315 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SPATS1Q496A3 300 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ARMCX4Q5H9R4 360 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CEP78Q5JTW2 689 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 FAM219BQ5XKK7 198 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 STEAP4Q687X5 459 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 FCRLBQ6BAA4 426 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 GRHL2Q6ISB3 625 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 BTNL3Q6UXE8 466 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RBMS3Q6XE24 437 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 COLCA1Q6ZS62 124 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TSEN54Q7Z6J9 526 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 LDB1Q86U70 411 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PDSS2Q86YH6 399 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CREG2Q8IUH2 290 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 EPHX4Q8IUS5 362 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 FAM20CQ8IXL6 584 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 KATNAL2Q8IYT4 538 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OR2L13Q8N349 312 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PDILTQ8N807 584 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 DRAXINQ8NBI3 349 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OR5M8Q8NGP6 311 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ITLN1Q8WWA0 313 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 MALSU1Q96EH3 234 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NEIL1Q96FI4 390 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PGBD1Q96JS3 809 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OR5B2Q96R09 309 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CCT7Q99832 543 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 GORASP1Q9BQQ3 440 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 LINC00467Q9BRT7 94 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NAA11Q9BSU3 229 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 NAT9Q9BTE0 207 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PCDHAC1Q9H158 963 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 LIME1Q9H400 295 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 GSTO2Q9H4Y5 243 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 IFT22Q9H7X7 185 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SEC61A2Q9H9S3 476 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 KRT84Q9NSB2 600 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ANO10Q9NW15 660 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 THUMPD1Q9NXG2 353 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ASH2LQ9UBL3 628 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ARMCX3Q9UH62 379 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CIDEBQ9UHD4 219 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 APLNQ9ULZ1 77 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OARD1Q9Y530 152 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PCYT1BQ9Y5K3 369 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 V9GYY5 206 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ZANQ9Y493 2812 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM238LA0A1B0GVL6 79 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 A0A1W2PRB8 838 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM189A5PLL7 270 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM210A6NLX4 147 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 MIF4GDA9UHW6 222 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 H3BQV1 296 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 BIRC5O15392 142 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 CEP104O60308 925 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OR2F2O95006 317 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 HAND1O96004 215 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 OR8U8P0C7N1 319 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 MUC1P15941 1255 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TNNI1P19237 187 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SLC9A1P19634 815 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RPL3P39023 403 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 MAGEA5P43359 124 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 GPR6P46095 362 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 RPS5P46782 204 aaKnown RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 SCNN1BP51168 640 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ERVK-8P63133 956 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ERVK-25P63136 954 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF45Q02386 682 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 HSPA14Q0VDF9 509 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 PDE7AQ13946 482 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 BRD3Q15059 726 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 ALKBH6Q3KRA9 238 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 DCAF17Q5H9S7 520 aaPredicted RBP1.24□□□□□ -2.21
LINC00643-201ENST00000334389 C6orf136Q5SQH8 315 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 FAM91A1Q658Y4 838 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 DENND2CQ68D51 928 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 C8orf74Q6P047 294 aa1.24□□□□□ -2.21
LINC00643-201ENST00000334389 TRIM65Q6PJ69 517 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms