RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 OR7G1Q8NGA0 311 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 OR4M2Q8NGB6 313 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 PTPMT1Q8WUK0 201 aaPredicted RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 RASD2Q96D21 266 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 PELI1Q96FA3 418 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 CHRNA10Q9GZZ6 450 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 CHRDQ9H2X0 955 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 AGRPO00253 132 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 MBTPS2O43462 519 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 SPI1P17947 270 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 ADH7P40394 386 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 SLC37A1P57057 533 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 ACTA2P62736 377 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 ACTG2P63267 376 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 KCNAB1Q14722 419 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 GRM7Q14831 915 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 CDK5R1Q15078 307 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 SF3A2Q15428 464 aaKnown RBP13.32□□□□□ -0.28
TPM3-206ENST00000330188 BCL2A1Q16548 175 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 CDONQ4KMG0 1287 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 NKAIN2Q5VXU1 208 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 PLET1Q6UQ28 207 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 OR4M1Q8NGD0 313 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 OR14A16Q8NHC5 309 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 CAPSLQ8WWF8 208 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 SLC7A6Q92536 515 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 SMIM19Q96E16 107 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 GPX7Q96SL4 187 aaPredicted RBP13.32□□□□□ -0.28
TPM3-206ENST00000330188 NMNAT2Q9BZQ4 307 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 ITGB1BP2Q9UKP3 347 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 COPS3Q9UNS2 423 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 MPDZO75970 2070 aa13.32□□□□□ -0.28
TPM3-206ENST00000330188 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 IL33O95760 270 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PSKH1P11801 424 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 DIO1P49895 249 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 GDI2P50395 445 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 ERVK-25P63136 954 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 LGALS3BPQ08380 585 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SKP2Q13309 424 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 BIKQ13323 160 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PON3Q15166 354 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SF3B4Q15427 424 aaKnown RBP eCLIP13.31□□□□□ -0.281e-13■■□□□ 12.6
TPM3-206ENST00000330188 ISXQ2M1V0 245 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SLC25A35Q3KQZ1 300 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 ATG4DQ86TL0 474 aaPredicted RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 GHDCQ8N2G8 530 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SAMD12Q8N8I0 201 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 MOSPD2Q8NHP6 518 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 CCNL2Q96S94 520 aaPredicted RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 NXF5Q9H1B4 397 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 CCDC86Q9H6F5 360 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 UBQLN4Q9NRR5 601 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PNO1Q9NRX1 252 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 EPHA6Q9UF33 1036 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 NUFIP1Q9UHK0 495 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 CA14Q9ULX7 337 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 EML5Q05BV3 1969 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 ELOA3DA6NLF2 546 aaPredicted RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 H3BMH7 237 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 SELENOFO60613 162 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PAHP00439 452 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 GSTT2P0CG29 244 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 UBL4AP11441 157 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 IGFBP4P22692 258 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PPICP45877 212 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 PRPS1P60891 318 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 ZFP69Q49AA0 526 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 OGFOD3Q6PK18 319 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 APOOLQ6UXV4 268 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 TRMT10AQ8TBZ6 339 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 PHOSPHO1Q8TCT1 267 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 CLIP3Q96DZ5 547 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 OR2B2Q9GZK3 357 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 RAB33BQ9H082 229 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
TPM3-206ENST00000330188 NLKQ9UBE8 527 aa13.31□□□□□ -0.28
TPM3-206ENST00000330188 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 FAM240BA0A1B0GVZ2 78 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 A8MUA0 341 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 LMO7DNF2Z398 122 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SCDO00767 359 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 IDH3BO43837 385 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms