RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 C16orf58Q96GQ5 468 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 MRGPRX3Q96LB0 322 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SORCS2Q96PQ0 1159 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 LHX6Q9UPM6 363 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 RPH3AQ9Y2J0 694 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 PIPP12273 146 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 GABRG2P18507 467 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 IGFBP6P24592 240 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ARF1P84077 181 aaKnown RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF91Q05481 1191 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 DUSP8Q13202 625 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 LSAMPQ13449 338 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 AAED1Q7RTV5 226 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 OR2B2Q9GZK3 357 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SLC6A17Q9H1V8 727 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ABCG5Q9H222 651 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 KLK4Q9Y5K2 254 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 NUDT7P0C024 238 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 NID1P14543 1247 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 HTR1FP30939 366 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 PIGFQ07326 219 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 GDF7Q7Z4P5 450 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 PXKQ7Z7A4 578 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 GGHQ92820 318 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM9BQ9NQ34 198 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 POM121BA6NF01 834 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF850A8MQ14 1090 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 CSF2P04141 144 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 RAC2P15153 192 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ABOP16442 354 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 S100A10P60903 97 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GPR50Q13585 617 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GPR19Q15760 415 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 NTRK2Q16620 822 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 DLEU7Q6UYE1 221 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 SSX6Q7RTT6 188 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 RPS19BP1Q86WX3 136 aaKnown RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 WDR34Q96EX3 536 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 WDR76Q9H967 626 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 M0R129 80 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 MBTPS2O43462 519 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 LGI1O95970 557 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 CD14P08571 375 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF81P51508 661 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ATAD3CQ5T2N8 411 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 RNF175Q8N4F7 328 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 OR52N1Q8NH53 320 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 CPT1CQ8TCG5 803 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 POLE4Q9NR33 117 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 KLF13Q9Y2Y9 288 aaPredicted RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 WNT11O96014 354 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GABRA5P31644 462 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 BSGP35613 385 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 RGS6P49758 472 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 SH2D5Q6ZV89 423 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM150AQ86TG1 271 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 LILRA3Q8N6C8 439 aaPredicted RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 KCNE4Q8WWG9 221 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 MKRN2Q9H000 416 aaKnown RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 B3GNT3Q9Y2A9 372 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF175Q9Y473 711 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 V9GY05 133 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 COL4A5P29400 1685 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 LINC01387J3KSC0 135 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ACSM3Q53FZ2 586 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 ALG14Q96F25 216 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 CAMK2AQ9UQM7 478 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 TRAV27A0A087WT01 109 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 NUDT21O43809 227 aaKnown RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 IFNGR1P15260 489 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GNRHRP30968 328 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 PNLIPRP2P54317 469 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 GRK1Q15835 563 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 MPEG1Q2M385 716 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM176BQ3YBM2 270 aaPredicted RBP10.57□□□□□ -0.72
COL4A5-201ENST00000328300 SHISA6Q6ZSJ9 500 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 VN1R3Q9BXE9 311 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 NUBP2Q9Y5Y2 271 aa10.57□□□□□ -0.72
COL4A5-201ENST00000328300 CD79AP11912 226 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ECH1Q13011 328 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 EIF2S3LQ2VIR3 472 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 HAGHLQ6PII5 290 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 VASH1Q7L8A9 365 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TMPRSS9Q7Z410 1059 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ELMOD2Q8IZ81 293 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 CYB561A3Q8NBI2 242 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 DUSP19Q8WTR2 217 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 PRRT1Q99946 306 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM246Q9BRR3 403 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 SLAMF8Q9P0V8 285 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 GHRLQ9UBU3 117 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms