RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TGFBR1P36897 503 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 AQP2P41181 271 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 ETV1P50549 477 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 IL10RAQ13651 578 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 EXT1Q16394 746 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 ANKRD13BQ86YJ7 626 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 C10orf53Q8N6V4 93 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 M1APQ8TC57 530 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 SLC22A8Q8TCC7 542 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 TTC9Q92623 222 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 LRFN3Q9BTN0 628 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 PRRG3Q9BZD7 231 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 OR11A1Q9GZK7 315 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 ZNF337Q9Y3M9 751 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 CHCHD2Q9Y6H1 151 aaPredicted RBP16.72■□□□□ 0.27
USP39-201ENST00000323701 CNTRLQ7Z7A1 2325 aa16.72■□□□□ 0.27
USP39-201ENST00000323701 A0A1W2PQ72 361 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 TMEM72A0PK05 275 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 BLOC1S5-TXNDC5H3BN57 136 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 HSMCR30P0CW71 290 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 GP1BBP13224 206 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 CXCR1P25024 350 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 CD79BP40259 229 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 LSM3P62310 102 aaKnown RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 C17orf67Q0P5P2 114 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 CRMP1Q14194 572 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 SPCS2Q15005 226 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 NXNL2Q5VZ03 156 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 IL20RBQ6UXL0 311 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 CYP4Z2PQ8N1L4 340 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 ERMAPQ96PL5 475 aaPredicted RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 CDCP1Q9H5V8 836 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 MRPS18AQ9NVS2 196 aaKnown RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 TAS2R10Q9NYW0 307 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 VDAC3Q9Y277 283 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 IER3IP1Q9Y5U9 82 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 TMED7-TICAM2A0A0A6YYA0 188 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 TNFSF15O95150 251 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 NDUFB2O95178 105 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 GYPBP06028 91 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 ASAH2BP0C7U1 165 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 PEPDP12955 493 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 HIST1H1CP16403 213 aaKnown RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 CASP3P42574 277 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 ITGADQ13349 1161 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 MED22Q15528 200 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 ZNF468Q5VIY5 522 aaPredicted RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 PRAMEF20Q5VT98 475 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 GLRX5Q86SX6 157 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 GHDCQ8N2G8 530 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 CCNL2Q96S94 520 aaPredicted RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 PTDSS2Q9BVG9 487 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 TEX12Q9BXU0 123 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 NANSQ9NR45 359 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 KLHL1Q9NR64 748 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 DIMT1Q9UNQ2 313 aaKnown RBP16.71■□□□□ 0.27
USP39-201ENST00000323701 TMED7Q9Y3B3 224 aa16.71■□□□□ 0.27
USP39-201ENST00000323701 TERTO14746 1132 aaKnown RBP16.7■□□□□ 0.26
USP39-201ENST00000323701 SUSD5O60279 629 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 RAB40ALP0C0E4 278 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 CD36P16671 472 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 SLC6A6P31641 620 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 FOXK1P85037 733 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 NIPAL3Q6P499 406 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 SLC37A3Q8NCC5 494 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 OR4K13Q8NH42 304 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 ZPLD1Q8TCW7 415 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 RAB2BQ8WUD1 216 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 KISS1RQ969F8 398 aaPredicted RBP16.7■□□□□ 0.26
USP39-201ENST00000323701 METTL7AQ9H8H3 244 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 C12orf10Q9HB07 376 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 GALNT8Q9NY28 637 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 PRKCAP17252 672 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 ENDOUP21128 410 aaKnown RBP16.7■□□□□ 0.26
USP39-201ENST00000323701 TMED10P49755 219 aaKnown RBP16.7■□□□□ 0.26
USP39-201ENST00000323701 ERVK-25P63136 954 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 ARMCX4Q5H9R4 360 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 SIRT6Q8N6T7 355 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 SDR9C7Q8NEX9 313 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 LIPHQ8WWY8 451 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 FCGR1BQ92637 280 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 FBXL2Q9UKC9 423 aa16.7■□□□□ 0.26
USP39-201ENST00000323701 LOC101059948A0A1B0GTJ6 334 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 ANKUB1A6NFN9 424 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 NPIPB7O75200 414 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 GABARAPO95166 117 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 BGLAPP02818 100 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 FTH1P19P0C7X4 201 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 ZNF182P17025 639 aaPredicted RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 IL11P20809 199 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 TCEA1P23193 301 aaKnown RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 HTR1FP30939 366 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 RPL4P36578 427 aaKnown RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 POLR2HP52434 150 aaKnown RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 RAB40BQ12829 278 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 NFATC3Q12968 1075 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 EIF3IQ13347 325 aaKnown RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 SSPNQ14714 243 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 B3GNTL1Q67FW5 361 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms