RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SPACA6W5XKT8 324 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TTLL8A6PVC2 850 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GPR89AB7ZAQ6 455 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 WRBO00258 174 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ERI3O43414 337 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CTNSO60931 367 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GPR89BP0CG08 455 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CKBP12277 381 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TAS2R19P59542 299 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ERVK-25P63136 954 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 NAAAQ02083 359 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TNFRSF17Q02223 184 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CDNFQ49AH0 187 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MRM1Q6IN84 353 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DNM1P46Q6ZS02 220 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CDRT4Q8N9R6 151 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR4D9Q8NGE8 314 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 AUTS2Q8WXX7 1259 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 PIGKQ92643 395 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 WFDC6Q9BQY6 131 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SARGQ9BW04 601 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TEX101Q9BY14 249 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ADGRL4Q9HBW9 690 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SLC7A7Q9UM01 511 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CARHSP1Q9Y2V2 147 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SBF1O95248 1867 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DICER1Q9UPY3 1922 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 XRCC3O43542 346 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FRS3O43559 492 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CD8AP01732 235 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZGLP1P0C6A0 271 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 APEHP13798 732 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 HLA-GP17693 338 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CCL23P55773 120 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SRSF4Q08170 494 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ANKRD16Q6P6B7 361 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM205Q6UW68 189 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 C17orf99Q6UX52 265 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 LILRA3Q8N6C8 439 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 INO80EQ8NBZ0 244 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GPR148Q8TDV2 347 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SLC25A38Q96DW6 304 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CNRIP1Q96F85 164 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF251Q9BRH9 671 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DPH1Q9BZG8 443 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 LMAN2LQ9H0V9 348 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CDCP1Q9H5V8 836 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DUSP22Q9NRW4 184 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MEGF11A6BM72 1044 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 F5H0A9 414 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CDC42EP2O14613 210 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SPDEFO95238 335 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF35P13682 527 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GABRR2P28476 465 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 RPL35P42766 123 aaKnown RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FGL2Q14314 439 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 AWAT2Q6E213 333 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 VRK2Q86Y07 508 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GTPBP8Q8N3Z3 284 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR5M8Q8NGP6 311 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 PXYLP1Q8TE99 480 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM255BQ8WV15 326 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SLC39A7Q92504 469 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF559Q9BR84 538 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MS4A7Q9GZW8 240 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CA10Q9NS85 328 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 C5AR2Q9P296 337 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZSWIM8A7E2V4 1837 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 RFXAPO00287 272 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DVL2O14641 736 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 NID1P14543 1247 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SPI1P17947 270 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 BLOC1S1P78537 153 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SORDQ00796 357 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 GGTLC2Q14390 218 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TP53I3Q53FA7 332 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FAHD2BQ6P2I3 314 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FRRS1Q6ZNA5 592 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ACOT4Q8N9L9 421 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR14A16Q8NHC5 309 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SYNPRQ8TBG9 265 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FAHD2AQ96GK7 314 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 IL17FQ96PD4 163 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF587Q96SQ5 575 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FANCFQ9NPI8 374 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZFP57Q9NU63 452 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CTSFQ9UBX1 484 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM82A0PJX8 343 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 PHYHO14832 338 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MAGEB4O15481 346 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FGF19O95750 216 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FOSL1P15407 271 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 FUT5Q11128 374 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MEF2DQ14814 521 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CEBPEQ15744 281 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms