RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PEX14O75381 377 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 CTSBP07858 339 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 HIST1H1TP22492 207 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 ATP5A1P25705 553 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 NTSP30990 170 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 RGS19P49795 217 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 RGS8P57771 180 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 HHEXQ03014 270 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 KLF9Q13886 244 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 GID4Q8IVV7 300 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 GJD3Q8N144 294 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 MFSD9Q8NBP5 474 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 OR6M1Q8NGM8 313 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 ZDHHC1Q8WTX9 485 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 REG4Q9BYZ8 158 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 ACTR6Q9GZN1 396 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 PITHD1Q9GZP4 211 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 BRD7Q9NPI1 651 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 GPR27Q9NS67 375 aa15.83■□□□□ 0.12
SCAMP4-201ENST00000316097 MT-ND5P03915 603 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 THY1P04216 161 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ZNF888P0CJ79 500 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ATF1P18846 271 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 CD38P28907 300 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 CSNK1EP49674 416 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ANXA11P50995 505 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 UBE2IP63279 158 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ZMYND11Q15326 602 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC22A10Q63ZE4 541 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 C3P1Q6ZMU1 363 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 MEPCEQ7L2J0 689 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ELMOD3Q96FG2 381 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ZNF578Q96N58 590 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 NDC1Q9BTX1 674 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 MS4A7Q9GZW8 240 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC38A1Q9H2H9 487 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 J3QLW9 94 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 SYT5O00445 386 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 TOR1AO14656 332 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 PLPP2O43688 288 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 TFP02787 698 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ZNF19P17023 458 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 GDNFP39905 211 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 VEGFCP49767 419 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 RPS7P62081 194 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 DUSP2Q05923 314 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC9A5Q14940 896 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 DECR1Q16698 335 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 ACSM3Q53FZ2 586 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 NHLRC3Q5JS37 347 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 FIGLAQ6QHK4 219 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 CFAP77Q6ZQR2 320 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 CCDC116Q8IYX3 515 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 UXS1Q8NBZ7 420 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 TTLQ8NG68 377 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 OR2L5Q8NG80 312 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 LMX1AQ8TE12 382 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 SMAP2Q8WU79 429 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 CXorf58Q96LI9 332 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 C7orf50Q9BRJ6 194 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 LRP4O75096 1905 aa15.82■□□□□ 0.12
SCAMP4-201ENST00000316097 A0A1W2PRG6 482 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 KLF4O43474 513 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 FUT1P19526 365 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 CD27P26842 260 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 KIR2DS3Q14952 304 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 C6orf132Q5T0Z8 1188 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 GDF7Q7Z4P5 450 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 CMIPQ8IY22 773 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 HAVCR2Q8TDQ0 301 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC41A3Q96GZ6 507 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 C4orf36Q96KX1 117 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 OR2A5Q96R48 311 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 MCHR1Q99705 422 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 OR10A4Q9H209 315 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 MRPS2Q9Y399 296 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 MFSD2BA6NFX1 497 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 ZNF860A6NHJ4 632 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 TUBAL3A6NHL2 446 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 NUPL2O15504 423 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 GMDSO60547 372 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 DEFB134Q4QY38 66 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 MBOAT2Q6ZWT7 520 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 PRSS41Q7RTY9 318 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 SLITRK4Q8IW52 837 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 MOSPD2Q8NHP6 518 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 NR4A3Q92570 626 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 GCDHQ92947 438 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 FBXW5Q969U6 566 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC22A18Q96BI1 424 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 SHDQ96IW2 340 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 ZMIZ1Q9ULJ6 1067 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 SESN1Q9Y6P5 492 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 POM121CA8CG34 1229 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 ZGLP1P0C6A0 271 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 CXCL2P19875 107 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 TGM3Q08188 693 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 DEFB110Q30KQ9 67 aa15.81■□□□□ 0.12
SCAMP4-201ENST00000316097 PXKQ7Z7A4 578 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms