RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FAM83EQ2M2I3 478 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CFAP157Q5JU67 520 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 PPM1LQ5SGD2 360 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF470Q6ECI4 717 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SULT1C3Q6IMI6 304 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 KIAA1161Q6NSJ0 714 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 Q6ZRG5 221 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CMC1Q7Z7K0 106 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 TMEM150AQ86TG1 271 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 C10orf107Q8IVU9 208 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 TET1Q8NFU7 2136 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 PHOSPHO2Q8TCD6 241 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 BLOC1S5Q8TDH9 187 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 DDI1Q8WTU0 396 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CCDC126Q96EE4 140 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 ELMO2Q96JJ3 720 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 RAB40CQ96S21 281 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 FEM1AQ9BSK4 669 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 ILKAPQ9H0C8 392 aaPredicted RBP3.42□□□□□ -1.86
SMCO3-201ENST00000316048 MFSD1Q9H3U5 465 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CAB39LQ9H9S4 337 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 KCNK13Q9HB14 408 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SPHK2Q9NRA0 654 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 EMCNQ9ULC0 261 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 PROCRQ9UNN8 238 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CPQQ9Y646 472 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 MICAL3Q7RTP6 2002 aa3.42□□□□□ -1.86
SMCO3-201ENST00000316048 MYO18AQ92614 2054 aaKnown RBP3.42□□□□□ -1.86
SMCO3-201ENST00000316048 CXorf51AA0A1B0GTR3 108 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 KRTAP29-1A8MX34 341 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SLCO1B7G3V0H7 640 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 TRAFD1O14545 582 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 APBB3O95704 486 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 NQO1P15559 274 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OGNP20774 298 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CALB2P22676 271 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MMP12P39900 470 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 FHITP49789 147 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 TAS2R39P59534 338 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RHOAP61586 193 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 NCALDP61601 193 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SNRPD1P62314 119 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RPS4XP62701 263 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ACVR1Q04771 509 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ELP6Q0PNE2 266 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 KLF5Q13887 457 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 FAM45BPQ6NSW5 357 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SLC25A24Q6NUK1 477 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ZYG11AQ6WRX3 759 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ZCCHC23Q6ZST2 131 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF557Q8N988 423 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OR9Q2Q8NGE9 314 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 C8orf46Q8TAG6 207 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 FAM45AQ8TCE6 357 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MAPK15Q8TD08 544 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PDCD6IPQ8WUM4 868 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PRICKLE1Q96MT3 831 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OMDQ99983 421 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MRPL57Q9BQC6 102 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ATG10Q9H0Y0 220 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PALMDQ9NP74 551 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 FBXO6Q9NRD1 293 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 NLE1Q9NVX2 485 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MRPS28Q9Y2Q9 187 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CSNK1G3Q9Y6M4 447 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 DOCK4Q8N1I0 1966 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 NYNRINQ9P2P1 1898 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 A0A087X002 238 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 LINC00854A0A1B0GVQ3 168 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OR5H15A6NDH6 313 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 C15orf61A6NNL5 157 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SH2D1BO14796 132 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 STX7O15400 261 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ZMPSTE24O75844 475 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF432O94892 652 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 GOT2P00505 430 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 AMBPP02760 352 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SERPINA6P08185 405 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SLC35E2BP0CK96 405 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CCDC166P0CW27 439 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PAICSP22234 425 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SERPINB5P36952 375 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CSKP41240 450 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CSNK1DP48730 415 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CSRP3P50461 194 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RPL14P50914 215 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SGSHP51688 502 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MNAT1P51948 309 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RPL26P61254 145 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 AP1S1P61966 158 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RAD51Q06609 339 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RIPK1Q13546 671 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 METTL21CQ5VZV1 264 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ASRGL1Q7L266 308 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 GLT6D1Q7Z4J2 308 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SLC22A9Q8IVM8 553 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms