RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CEPT1Q9Y6K0 416 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 KDM4EB2RXH2 506 aaPredicted RBP12.59□□□□□ -0.39
DDX54-202ENST00000314045 SOCS6O14544 535 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 MAS1P04201 325 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 IGFBP1P08833 259 aaPredicted RBP12.59□□□□□ -0.39
DDX54-202ENST00000314045 SLC1A3P43003 542 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 DTX3Q8N9I9 347 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 SLC37A3Q8NCC5 494 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 ZFAND2BQ8WV99 257 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 TM9SF4Q92544 642 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 Q96M85 177 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 SIRT5Q9NXA8 310 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 VNN3Q9NY84 501 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 NPIPB8E9PQR5 432 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 TAF4O00268 1085 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 TPD52L2O43399 206 aaKnown RBP12.59□□□□□ -0.39
DDX54-202ENST00000314045 PRKYO43930 277 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 IGHG1P01857 330 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 EIF1P41567 113 aaKnown RBP12.59□□□□□ -0.39
DDX54-202ENST00000314045 P2RX1P51575 399 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 COL28A1Q2UY09 1125 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 FAM69AQ5T7M9 428 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 BORAQ6PGQ7 559 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 TMPPEQ6ZT21 453 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 UBE3DQ7Z6J8 389 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 ALG12Q9BV10 488 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 DDAH2O95865 285 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 TGFBR2P37173 567 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 MRPL49Q13405 166 aaKnown RBP12.58□□□□□ -0.39
DDX54-202ENST00000314045 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 CARFQ8N187 725 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.39
DDX54-202ENST00000314045 NTN4Q9HB63 628 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 TAS2R16Q9NYV7 291 aa12.58□□□□□ -0.39
DDX54-202ENST00000314045 NDRG4Q9ULP0 352 aaKnown RBP12.58□□□□□ -0.39
DDX54-202ENST00000314045 A0A1B0GTQ1 180 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 PTHP01270 115 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ADH7P40394 386 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 CSRP3P50461 194 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 C21orf58P58505 322 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 BCL2L15Q5TBC7 163 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 C1orf140Q5VVS0 124 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 DPY19L2P2Q6ZN68 376 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 CAPSLQ8WWF8 208 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 INPP5EQ9NRR6 644 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 FARSAQ9Y285 508 aaKnown RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 PCM1Q15154 2024 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 FAM172BPA6NC97 362 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ICOSLGO75144 302 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 RBM34P42696 430 aaKnown RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 MLLT11Q13015 90 aaPredicted RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 SETD6Q8TBK2 473 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 GPR148Q8TDV2 347 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 NUDT9Q9BW91 350 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 PLEK2Q9NYT0 353 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 CACNA1GO43497 2377 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 OR6C76A6NM76 312 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 F5H5K5 113 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 SLC19A2O60779 497 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 OR7A10O76100 309 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ATE1O95260 518 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 DLSTP36957 453 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 FRKP42685 505 aaPredicted RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 PNLIPRP2P54317 469 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ACSM3Q53FZ2 586 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 ACSM5Q6NUN0 579 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 LRRN1Q6UXK5 716 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 OR13C3Q8NGS6 347 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 THOC3Q96J01 351 aaKnown RBP12.58□□□□□ -0.4
DDX54-202ENST00000314045 VN1R1Q9GZP7 353 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 SYT4Q9H2B2 425 aa12.58□□□□□ -0.4
DDX54-202ENST00000314045 PDCD11Q14690 1871 aaKnown RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 NOS1APO75052 506 aaPredicted RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 HNRNPFP52597 415 aaKnown RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 STARD6P59095 220 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 PLK5Q496M5 336 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 MRM1Q6IN84 353 aaKnown RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 DHRS13Q6UX07 377 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 ANKRD13BQ86YJ7 626 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 SLC22A18ASQ8N1D0 253 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 KDM8Q8N371 416 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 HAVCR2Q8TDQ0 301 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 ZG16BQ96DA0 208 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 ULBP2Q9BZM5 246 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 RP1P56715 2156 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 SVILO95425 2214 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 VSTM5A8MXK1 200 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 PATE3B3GLJ2 98 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 TNFSF14O43557 240 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms