RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TMPRSS11EQ9UL52 423 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 C4orf47A7E2U8 309 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 RTCAO00442 366 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 BMP1P13497 986 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 DDOSTP39656 456 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 FABP6P51161 128 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 FOXA1P55317 472 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 CLDN6P56747 220 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 FLI1Q01543 452 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 SLC14A1Q13336 389 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 OR4C11Q6IEV9 310 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 TMPRSS7Q7RTY8 843 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 PDZD3Q86UT5 571 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 PPP1R3BQ86XI6 285 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 CADM3Q8N126 398 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 NPRL2Q8WTW4 380 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 FUBP1Q96AE4 644 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 C14orf79Q96F83 325 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 METTL2AQ96IZ6 378 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 GORASP2Q9H8Y8 452 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 CD300LBA8K4G0 201 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ARHGAP33O14559 1287 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 TP53I11O14683 189 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 P2RX6O15547 441 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 CYTIPO60759 359 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 TP53P04637 393 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 F3P13726 295 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 KIAA1024LP59773 190 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SLC9A3R2Q15599 337 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SULF2Q8IWU5 870 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 OR4M1Q8NGD0 313 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 OR51Q1Q8NH59 317 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ABHD5Q8WTS1 349 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 CHTF18Q8WVB6 975 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ELF4Q99607 663 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 CENPOQ9BU64 300 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 OR11A1Q9GZK7 315 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 C11orf54Q9H0W9 315 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 GSTO2Q9H4Y5 243 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 RBFOX1Q9NWB1 397 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 B3GNT2Q9NY97 397 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 TAS2R16Q9NYV7 291 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 METTL12A8MUP2 240 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 TNFRSF10CO14798 259 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SLC43A1O75387 559 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SERPINE2P07093 398 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 DRD2P14416 443 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ARL6IP1Q15041 203 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 MLC1Q15049 377 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 EBPQ15125 230 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 CPZQ66K79 652 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 NIPAL3Q6P499 406 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ASPGQ86U10 573 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 OR13F1Q8NGS4 319 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 LMO3Q8TAP4 145 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ZNF707Q96C28 371 aaPredicted RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 C10orf90Q96M02 699 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SAP130Q9H0E3 1048 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 VAPAQ9P0L0 249 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ABRACLQ9P1F3 81 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SLC22A23A1A5C7 686 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 I6L893 689 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 GALR2O43603 387 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 SPINT3P49223 89 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TLE1Q04724 770 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 LTBQ06643 244 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 KIAA0141Q14154 515 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 ABHD17BQ5VST6 288 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 LETMD1Q6P1Q0 360 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 NXPE4Q6UWF7 544 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 ZNF551Q7Z340 670 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 OR6V1Q8N148 313 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 BPIFB2Q8N4F0 458 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RNF141Q8WVD5 230 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 ST8SIA4Q92187 359 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SEC22AQ96IW7 307 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TIMM29Q9BSF4 260 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 FAM212BQ9NTI7 297 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 SDHAF2Q9NX18 166 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 A0A1W2PPV4 95 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 CBY3A6NI87 242 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SURF4O15260 269 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 CLN5O75503 358 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RD3LP0DJH9 198 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 MGST1P10620 155 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 S100A11P31949 105 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 GAB1Q13480 694 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RBMS2Q15434 407 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 PARS2Q7L3T8 475 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 PRR18Q8N4B5 295 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SDR9C7Q8NEX9 313 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 MARC2Q969Z3 335 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TXN2Q99757 166 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 MTHFD2LQ9H903 347 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 AGAP14A8MT82 685 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 K7ERQ8 282 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 IMPA2O14732 288 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms