RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RAP2AP10114 183 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 CCNA2P20248 432 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 ENPP1P22413 925 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 GTF2E2P29084 291 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 SHC1P29353 583 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 MAGEA2P43356 314 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 AGFG1P52594 562 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 DGCR6Q14129 220 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 TRAM2Q15035 370 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF239Q16600 458 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 C1orf146Q5VVC0 180 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 ZGRF1Q86YA3 2104 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 RNF113BQ8IZP6 322 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 ASB5Q8WWX0 329 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 PIP5K1AQ99755 562 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 PRR14Q9BWN1 585 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 OR11A1Q9GZK7 315 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 CORINQ9Y5Q5 1042 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 UBR5O95071 2799 aaPredicted RBP16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 A0A1W2PNR3 127 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 LIPT2A6NK58 231 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 H0YC42 278 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNHIT1O43257 154 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 KRT36O76013 467 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 RCBTB2O95199 551 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 IL18BPO95998 194 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 H1F0P07305 194 aaKnown RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 CEACAM8P31997 349 aaPredicted RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 TPD52P55327 224 aaPredicted RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 VLDLRP98155 873 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 PMPCAQ10713 525 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 PAQR6Q6TCH4 344 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 SPATA24Q86W54 205 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 ZDHHC21Q8IVQ6 265 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 FAM26EQ8N5C1 309 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 FAM86B1Q8N7N1 296 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 PIK3C3Q8NEB9 887 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 PIGXQ8TBF5 258 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 TMEM239Q8WW34 195 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 ARL5BQ96KC2 179 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 RNF122Q9H9V4 155 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 NMNAT1Q9HAN9 279 aaPredicted RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 KRCC1Q9NPI7 259 aaPredicted RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 KLHL9Q9P2J3 617 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 ERRFI1Q9UJM3 462 aaPredicted RBP16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 V9GYQ6 96 aa16.04■□□□□ 0.16
SSSCA1-201ENST00000309328 TCRBV3S1A0A5B6 114 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 ZC3H12DA2A288 527 aaKnown RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 SEMA7AO75326 666 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 VAMP5O95183 116 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 LYPD3O95274 346 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 OPN1LWP04000 364 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 OPRM1P35372 400 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 NUP107P57740 925 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 OR2B6P58173 313 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 EGR4Q05215 589 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 PDK3Q15120 406 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 XKRXQ6PP77 449 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 FCRLAQ7L513 359 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 RRM2BQ7LG56 351 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 MCEMP1Q8IX19 187 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 SCAIQ8N9R8 606 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 RNF128Q8TEB7 428 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 ACOT11Q8WXI4 607 aaPredicted RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 CCDC120Q96HB5 630 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 GMPPAQ96IJ6 420 aaPredicted RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF845Q96IR2 970 aaPredicted RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 RSRC1Q96IZ7 334 aaKnown RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 DHRS1Q96LJ7 313 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 SEPHS2Q99611 448 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 SFXN3Q9BWM7 321 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 EMC3Q9P0I2 261 aa16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF629Q9UEG4 869 aaPredicted RBP16.03■□□□□ 0.16
SSSCA1-201ENST00000309328 IGKV1D-42A0A075B6H8 117 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 hCG_2039718K7EN88 272 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 AGFG2O95081 481 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 PRSS23O95084 383 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 PLGP00747 810 aaPredicted RBP16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 MT-ND1P03886 318 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 THY1P04216 161 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 CHRNB4P30926 498 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 H3F3AP84243 136 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 GTF3C1Q12789 2109 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 PPP4R4Q6NUP7 873 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 C3P1Q6ZMU1 363 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF808Q8N4W9 903 aaPredicted RBP16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 LINC00471Q8N535 108 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 ADPRHL1Q8NDY3 354 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 SF3B5Q9BWJ5 86 aaKnown RBP16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 SRXN1Q9BYN0 137 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 FKRPQ9H9S5 495 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 B3GALT5Q9Y2C3 310 aa16.02■□□□□ 0.16
SSSCA1-201ENST00000309328 FREM3P0C091 2139 aa16.01■□□□□ 0.15
SSSCA1-201ENST00000309328 PCNX3Q9H6A9 2034 aa16.01■□□□□ 0.15
SSSCA1-201ENST00000309328 FTCDNL1E5RQL4 147 aa16.01■□□□□ 0.15
SSSCA1-201ENST00000309328 GPR171O14626 319 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 729.2 ms