RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SIRT3Q9NTG7 399 aaPredicted RBP10.17□□□□□ -0.78
SMIM4-201ENST00000307106 REV1Q9UBZ9 1251 aa10.17□□□□□ -0.78
SMIM4-201ENST00000307106 ZDHHC2Q9UIJ5 367 aa10.17□□□□□ -0.78
SMIM4-201ENST00000307106 TRAPPC4Q9Y296 219 aa10.17□□□□□ -0.78
SMIM4-201ENST00000307106 KCNE3Q9Y6H6 103 aa10.17□□□□□ -0.78
SMIM4-201ENST00000307106 TANC2Q9HCD6 1990 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 A0A096LPE4 126 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 A0A1W2PPZ6 126 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ZNF587BE7ETH6 402 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 NPIPB8E9PQR5 432 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 PIP5K1BO14986 540 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ANKRD28O15084 1053 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 PLPP2O43688 288 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 SYNGR3O43761 229 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 EIF1BO60739 113 aaKnown RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 TBX19O60806 448 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 CSTAP01040 98 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FSHBP01225 129 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 TCN1P20061 433 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 CCNA2P20248 432 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 TAC1P20366 129 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 IMPDH1P20839 514 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FKBP2P26885 142 aaKnown RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 GCH1P30793 250 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 CLK1P49759 484 aaKnown RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 SLC35A1P78382 337 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 DAG1Q14118 895 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 REP15Q6BDI9 236 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 KRT80Q6KB66 452 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 GRINAQ7Z429 371 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FAM169BQ8N8A8 192 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FBXO25Q8TCJ0 367 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 BCL2L2Q92843 193 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 DVL3Q92997 716 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ZNF385AQ96PM9 386 aaKnown RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ZNF317Q96PQ6 595 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ALKBH3Q96Q83 286 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ZNF416Q9BWM5 594 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 C7orf69Q9H7B7 122 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 ZNF665Q9H7R5 613 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 MID1IP1Q9NPA3 183 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 FAF1Q9UNN5 650 aaPredicted RBP10.16□□□□□ -0.78
SMIM4-201ENST00000307106 CMAHPQ9Y471 501 aa10.16□□□□□ -0.78
SMIM4-201ENST00000307106 IGHV2OR16-5A0A0B4J2B6 119 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 CENPVL1A0A0U1RR11 272 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 SEC22BO75396 215 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 MDKP21741 143 aaPredicted RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 TP53BP2Q13625 1128 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 KIAA0040Q15053 153 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 GPR68Q15743 365 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 FBLN7Q53RD9 439 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 DOK3Q7L591 496 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 LSRQ86X29 649 aaPredicted RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 ADGRG3Q86Y34 549 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 OR9K2Q8NGE7 335 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 MAGEE2Q8TD90 523 aaPredicted RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 TAF15Q92804 592 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 RAB39BQ96DA2 213 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 TSSK3Q96PN8 268 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 SDF2Q99470 211 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 MRPL37Q9BZE1 423 aaKnown RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 NMUR2Q9GZQ4 415 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 NELFAQ9H3P2 528 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 RRAGDQ9NQL2 400 aaPredicted RBP10.15□□□□□ -0.78
SMIM4-201ENST00000307106 OXSMQ9NWU1 459 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 KCNE5Q9UJ90 142 aa10.15□□□□□ -0.78
SMIM4-201ENST00000307106 RAD51CO43502 376 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 RP2O75695 350 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 URI1O94763 535 aaPredicted RBP10.14□□□□□ -0.79
SMIM4-201ENST00000307106 GSNP06396 782 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 RNASE1P07998 156 aaKnown RBP10.14□□□□□ -0.79
SMIM4-201ENST00000307106 INHBAP08476 426 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 KRT16P08779 473 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 IMPDH2P12268 514 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 CBR1P16152 277 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 RYKP34925 604 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 PAFAH1B1P43034 410 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 EVX1P49640 407 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 SEC24CP53992 1094 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 CAV1Q03135 178 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 NPRL3Q12980 569 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 PDE7AQ13946 482 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 ZNF141Q15928 474 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 MSMPQ1L6U9 139 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 ATP6AP1LQ52LC2 224 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 OTUD3Q5T2D3 398 aaPredicted RBP10.14□□□□□ -0.79
SMIM4-201ENST00000307106 PAQR6Q6TCH4 344 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 ZIC4Q8N9L1 334 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 SYT14Q8NB59 555 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 CLHC1Q8NHS4 586 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
SMIM4-201ENST00000307106 OR7D2Q96RA2 312 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 MMP27Q9H306 513 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 ACSS3Q9H6R3 686 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 NOX3Q9HBY0 568 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms