RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM157BP0CG42 384 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 FOXK2Q01167 660 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 TMEM99Q8N816 258 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 LSMEM1Q8N8F7 131 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 AKAP1Q92667 903 aaKnown RBP eCLIP20.13■□□□□ 0.81
TPM4-201ENST00000300933 HLA-CQ95604 372 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 RFKQ969G6 155 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 KIAA1143Q96AT1 154 aaPredicted RBP20.13■□□□□ 0.81
TPM4-201ENST00000300933 SENP5Q96HI0 755 aaPredicted RBP20.13■□□□□ 0.81
TPM4-201ENST00000300933 KRCC1Q9NPI7 259 aaPredicted RBP20.13■□□□□ 0.81
TPM4-201ENST00000300933 MRPS18AQ9NVS2 196 aaKnown RBP20.13■□□□□ 0.81
TPM4-201ENST00000300933 TNFRSF10DQ9UBN6 386 aa20.13■□□□□ 0.81
TPM4-201ENST00000300933 A0A1B0GVT2 93 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 CIB4A0PJX0 185 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 LILRA5A6NI73 299 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 TRIM3O75382 744 aaPredicted RBP20.12■□□□□ 0.81
TPM4-201ENST00000300933 EFNA3P52797 238 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 VWA2Q5GFL6 755 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 ZBTB37Q5TC79 503 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 SHISA6Q6ZSJ9 500 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 OR6C4Q8NGE1 309 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 I3L521 148 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 SLC30A4O14863 429 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 PIAS2O75928 621 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 CSTAP01040 98 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 PPP3R1P63098 170 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 PLK5Q496M5 336 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 SLC25A45Q8N413 288 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 BRIX1Q8TDN6 353 aaKnown RBP20.12■□□□□ 0.81
TPM4-201ENST00000300933 ZNF559Q9BR84 538 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 ARHGAP9Q9BRR9 750 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 ZNF649Q9BS31 505 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 MARVELD1Q9BSK0 173 aa20.12■□□□□ 0.81
TPM4-201ENST00000300933 GTPBP1O00178 669 aaKnown RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 IMPA2O14732 288 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 PRAMEF2O60811 474 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 HMGN1P05114 100 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ENPP1P22413 925 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 HTR1FP30939 366 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 AGFG1P52594 562 aaKnown RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 HCCSP53701 268 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 RNLSQ5VYX0 342 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ASB18Q6ZVZ8 466 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ZC3HAV1LQ96H79 300 aaKnown RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 HYLS1Q96M11 299 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 TMEM43Q9BTV4 400 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 CUTCQ9NTM9 273 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 B3GNT2Q9NY97 397 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 MRPS17Q9Y2R5 130 aaKnown RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 SF3B6Q9Y3B4 125 aaKnown RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 CEP192Q8TEP8 1941 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 TMEM129A0AVI4 362 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 PDGFAP04085 211 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ZNF250P15622 560 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ARL4DP49703 201 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 CCR4P51679 360 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 CRMP1Q14194 572 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 ZNF615Q8N8J6 731 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 TOR1AIP2Q8NFQ8 470 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 HOXB13Q92826 284 aaPredicted RBP20.11■□□□□ 0.81
TPM4-201ENST00000300933 FSCN3Q9NQT6 498 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 PI4KAP42356 2102 aa20.11■□□□□ 0.81
TPM4-201ENST00000300933 C2orf92A0A1B0GVN3 265 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 MAGEB4O15481 346 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 OIP5O43482 229 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SERPINI2O75830 405 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 FOLR1P15328 257 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SLC35F3Q8IY50 421 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 RNF113BQ8IZP6 322 aaKnown RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZNF485Q8NCK3 441 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 OR10H4Q8NGA5 316 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 PTPMT1Q8WUK0 201 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 UFD1Q92890 307 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 HDHD2Q9H0R4 259 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 GSTK1Q9Y2Q3 226 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 EXOSC1Q9Y3B2 195 aaKnown RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 CD8B2A6NJW9 211 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 CHP2O43745 196 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SLC43A1O75387 559 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 CD8BP10966 210 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 FCN2Q15485 313 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 GARNL3Q5VVW2 1013 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 NIPAL3Q6P499 406 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZNF613Q6PF04 617 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 MED25Q71SY5 747 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 C17orf82Q86X59 251 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 CADM4Q8NFZ8 388 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZNF524Q96C55 264 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZDHHC12Q96GR4 267 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 GAL3ST4Q96RP7 486 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SMAD5Q99717 465 aaKnown RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 MGAT4AQ9UM21 535 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 PCDHGB7Q9Y5F8 929 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SIRT4Q9Y6E7 314 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 HLA-DQB1P01920 261 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 CLPSP04118 112 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 PAICSP22234 425 aaKnown RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 SKP1P63208 163 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 POU4F3Q15319 338 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 CBLN3Q6UW01 205 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms