RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 STK17BO94768 372 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 SLC6A8P48029 635 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 P2RX1P51575 399 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 ZNF485Q8NCK3 441 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 B4GALNT2Q8NHY0 566 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 TEAD3Q99594 435 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 KATNB1Q9BVA0 655 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 RERGLQ9H628 205 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 NANSQ9NR45 359 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 MED11Q9P086 117 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 C19orf25Q9UFG5 118 aaPredicted RBP23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 PISDQ9UG56 409 aa23.31■■□□□ 1.32
SDCCAG3-201ENST00000298537 J3QRE1 110 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 ZFAND5O76080 213 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 F13BP05160 661 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 INHBBP09529 407 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 HK1P19367 917 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 SLC2A5P22732 501 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 WNT4P56705 351 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 SPEM2Q0P670 501 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 CBFBQ13951 182 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 TIPARPQ7Z3E1 657 aaKnown RBP23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 FAM98AQ8NCA5 519 aaKnown RBP23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 TMEM203Q969S6 136 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 LRFN5Q96NI6 719 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 NMNAT3Q96T66 252 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 RACGAP1Q9H0H5 632 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 TNFRSF10DQ9UBN6 386 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 SPIN1Q9Y657 262 aaPredicted RBP23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 IGHV1-45A0A0A0MS14 117 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 PHC2Q8IXK0 858 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 OR11A1Q9GZK7 315 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 ISG20L2Q9H9L3 353 aaKnown RBP23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 ERVK13-1Q9NX77 482 aa23.3■■□□□ 1.32
SDCCAG3-201ENST00000298537 SHISA8B8ZZ34 492 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 ASAH2BP0C7U1 165 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 COX6A1P12074 109 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 ZNF3P17036 446 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 PGCP20142 388 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 CXCR1P25024 350 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 ARSKQ6UWY0 536 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 GID4Q8IVV7 300 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 ELP5Q8TE02 316 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 TIMP4Q99727 224 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 EDEM2Q9BV94 578 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 DEFB126Q9BYW3 111 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 SLIRPQ9GZT3 109 aaKnown RBP23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 NRIP3Q9NQ35 241 aa23.29■■□□□ 1.32
SDCCAG3-201ENST00000298537 LOC102723996A0A087X1L8 192 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 TMEM72A0PK05 275 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 B4E171 279 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 C9J4A7 227 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 IGHA1P01876 353 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 TSPAN7P41732 249 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 BMXP51813 675 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 HCCSP53701 268 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 MLLT11Q13015 90 aaPredicted RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 ARHGAP11AQ6P4F7 1023 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 RAB11FIP2Q7L804 512 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 ADGRG3Q86Y34 549 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 Q96M85 177 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 NXT1Q9UKK6 140 aaKnown RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 C12orf71A8MTZ7 269 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 GP1BBP13224 206 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 ANKDD1AQ495B1 522 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 DCAF12Q5T6F0 453 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 LRRC75AQ8NAA5 344 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 OR5L2Q8NGL0 311 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 RASL10BQ96S79 203 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 EXOSC4Q9NPD3 245 aaKnown RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 CHCHD3Q9NX63 227 aaKnown RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 ZNF346Q9UL40 294 aaKnown RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 EXOSC1Q9Y3B2 195 aaKnown RBP23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 CORINQ9Y5Q5 1042 aa23.28■■□□□ 1.32
SDCCAG3-201ENST00000298537 TMEM129A0AVI4 362 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 OPRL1P41146 370 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 CRYBB2P43320 205 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 DYNC1I2Q13409 638 aaKnown RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 C1DQ13901 141 aaKnown RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 EFR3AQ14156 821 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 LYPD4Q6UWN0 246 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 RFLNBQ8N5W9 214 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 OR2Y1Q8NGV0 311 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 OR8K3Q8NH51 312 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 PTDSS2Q9BVG9 487 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 TTTY10Q9BZA0 68 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 TAS2R10Q9NYW0 307 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 VDAC3Q9Y277 283 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 EP300Q09472 2414 aaPredicted RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 GALR2O43603 387 aaPredicted RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 TCEA1P23193 301 aaKnown RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 PTGDSP41222 190 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 ISXQ2M1V0 245 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 DPY19L2P2Q6ZN68 376 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 SPRYD4Q8WW59 207 aaPredicted RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 ZMYND19Q96E35 227 aaPredicted RBP23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 IMMP1LQ96LU5 166 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 HIF3AQ9Y2N7 669 aa23.27■■□□□ 1.32
SDCCAG3-201ENST00000298537 TMED7-TICAM2A0A0A6YYA0 188 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms