RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZCCHC18P0CG32 403 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 PTNP21246 168 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 ACVR1BP36896 505 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 SLC17A1Q14916 467 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 GABRA6Q16445 453 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 RPS26P11Q5JNZ5 115 aaPredicted RBP22.18■■□□□ 1.14
U2AF1-201ENST00000291552 ATG16L1Q676U5 607 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 CASP12Q6UXS9 341 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 DNM1P46Q6ZS02 220 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 TRMT61AQ96FX7 289 aaKnown RBP22.18■■□□□ 1.14
U2AF1-201ENST00000291552 AMBRA1Q9C0C7 1298 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 MANSC1Q9H8J5 431 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 ZIM2Q9NZV7 527 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 P2RX2Q9UBL9 471 aa22.18■■□□□ 1.14
U2AF1-201ENST00000291552 GDF2Q9UK05 429 aaPredicted RBP22.18■■□□□ 1.14
U2AF1-201ENST00000291552 ARFGEF3Q5TH69 2177 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 CCT8L1PA6NM43 557 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SLCO1B7G3V0H7 640 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 EIF1BO60739 113 aaKnown RBP22.17■■□□□ 1.14
U2AF1-201ENST00000291552 BCHEP06276 602 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 TFPTP0C1Z6 253 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 PRG2P13727 222 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 ZNF83P51522 516 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SLC25A3Q00325 362 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 GNA13Q14344 377 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 ETFDHQ16134 617 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 B3GLCTQ6Y288 498 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SSX8Q7RTT4 187 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 PEX5LQ8IYB4 626 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 WDR31Q8NA23 367 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SLC38A5Q8WUX1 472 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 MUS81Q96NY9 551 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 GRIP2Q9C0E4 1043 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 TPT1P8Q9HAU6 139 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SLC7A10Q9NS82 523 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 SLC9A8Q9Y2E8 581 aa22.17■■□□□ 1.14
U2AF1-201ENST00000291552 YLPM1P49750 1951 aaKnown RBP22.17■■□□□ 1.14
U2AF1-201ENST00000291552 ATRQ13535 2644 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 LIPT2A6NK58 231 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 E7EQL1 145 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 IDUAP35475 653 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 CRATP43155 626 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 DSTNP60981 165 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 GSTA3Q16772 222 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 LIN52Q52LA3 116 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 TSPO2Q5TGU0 170 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 C9orf135Q5VTT2 229 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 C11orf71Q6IPW1 123 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 PAQR6Q6TCH4 344 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 MSANTD1Q6ZTZ1 278 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 ZNF440Q8IYI8 595 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 CLIP4Q8N3C7 705 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 TMEM99Q8N816 258 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 ZIC4Q8N9L1 334 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 OR52P1PQ8NH57 321 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 TMEM19Q96HH6 336 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 NAA11Q9BSU3 229 aaPredicted RBP22.16■■□□□ 1.14
U2AF1-201ENST00000291552 TMBIM4Q9HC24 238 aa22.16■■□□□ 1.14
U2AF1-201ENST00000291552 ZNF443Q9Y2A4 671 aaPredicted RBP22.16■■□□□ 1.14
U2AF1-201ENST00000291552 KIAA1324LA8MWY0 1029 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-201ENST00000291552 HOXB9P17482 250 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-201ENST00000291552 CD40P25942 277 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 MAP2K6P52564 334 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 BNIP2Q12982 314 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 OTUD3Q5T2D3 398 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-201ENST00000291552 RNF220Q5VTB9 566 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 NKIRAS1Q9NYS0 192 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 DCTN4Q9UJW0 460 aa22.15■■□□□ 1.14
U2AF1-201ENST00000291552 UBDO15205 165 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 AKR7A3O95154 331 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 NUDT7P0C024 238 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 UQCRBP14927 111 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 P2RY4P51582 365 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 CRISP3P54108 245 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 CEACAM7Q14002 265 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 OR7A5Q15622 319 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 TMEM108Q6UXF1 575 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 TMEM45BQ96B21 275 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 ITCHQ96J02 903 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 ZNF385AQ96PM9 386 aaKnown RBP22.14■■□□□ 1.13
U2AF1-201ENST00000291552 C1QTNF6Q9BXI9 259 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 REG4Q9BYZ8 158 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 ADAM21Q9UKJ8 722 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 B3GALT5Q9Y2C3 310 aa22.14■■□□□ 1.13
U2AF1-201ENST00000291552 AQP7P3A6NL99 342 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 KLF11O14901 512 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 ANP32DO95626 131 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 PTAFRP25105 342 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 POLR2JP52435 117 aaKnown RBP22.13■■□□□ 1.13
U2AF1-201ENST00000291552 BEND6Q5SZJ8 279 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-201ENST00000291552 OR7E24Q6IFN5 339 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 CADM2Q8N3J6 435 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 OR9K2Q8NGE7 335 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 GTF2H4Q92759 462 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 RSPO3Q9BXY4 272 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-201ENST00000291552 PAIP1Q9H074 479 aaKnown RBP22.13■■□□□ 1.13
U2AF1-201ENST00000291552 ALG2Q9H553 416 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 SLC17A5Q9NRA2 495 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 CALML5Q9NZT1 146 aa22.13■■□□□ 1.13
U2AF1-201ENST00000291552 TMEM229AB2RXF0 380 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms