RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ZNF440Q8IYI8 595 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 GABRG1Q8N1C3 465 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 PIGXQ8TBF5 258 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 CPPED1Q9BRF8 314 aaPredicted RBP8.66□□□□□ -1.02
CCDC58-201ENST00000291458 SPATA9Q9BWV2 254 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 EMC3Q9P0I2 261 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 LEF1Q9UJU2 399 aaPredicted RBP8.66□□□□□ -1.02
CCDC58-201ENST00000291458 EDARQ9UNE0 448 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 RAI1Q7Z5J4 1906 aaPredicted RBP8.66□□□□□ -1.02
CCDC58-201ENST00000291458 HRNRQ86YZ3 2850 aaPredicted RBP8.66□□□□□ -1.02
CCDC58-201ENST00000291458 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
CCDC58-201ENST00000291458 A0A0G2JPF8 293 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CCT8L1PA6NM43 557 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 HNRNPCL2B2RXH8 293 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 HNRNPCL3B7ZW38 293 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 HNRNPCL1O60812 293 aaKnown RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 PGM3O95394 542 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 PMS2P2O95744 297 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 HNRNPCL4P0DMR1 293 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CD53P19397 219 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CBLP22681 906 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 IDUAP35475 653 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 ACAA2P42765 397 aaKnown RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 SLC1A3P43003 542 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 MRPL19P49406 292 aaKnown RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 ATP4BP51164 291 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 NCALDP61601 193 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 SLC35A1P78382 337 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CDK6Q00534 326 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 IL1RL1Q01638 556 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 FOXD4Q12950 439 aaPredicted RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 NFYCQ13952 458 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CEACAM7Q14002 265 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 TAB1Q15750 504 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 GLIPR1L2Q4G1C9 344 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 BEX5Q5H9J7 111 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 OTUD3Q5T2D3 398 aaPredicted RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 LRIF1Q5T3J3 769 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 RNF220Q5VTB9 566 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 WBP2NLQ6ICG8 309 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF704Q6ZNC4 412 aaPredicted RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.02
CCDC58-201ENST00000291458 P3H2Q8IVL5 708 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 STEAP2Q8NFT2 490 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 OIT3Q8WWZ8 545 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 APH1AQ96BI3 265 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 SLC25A36Q96CQ1 311 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 PERPQ96FX8 193 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 FOXC2Q99958 501 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 PIF1Q9H611 641 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 BCO1Q9HAY6 547 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 ZNF446Q9NWS9 450 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 TMEM181Q9P2C4 612 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 RPS6KB2Q9UBS0 482 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 TRIM33Q9UPN9 1127 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 ANGPT4Q9Y264 503 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 HDGFL3Q9Y3E1 203 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CHST2Q9Y4C5 530 aa8.65□□□□□ -1.02
CCDC58-201ENST00000291458 CIB4A0PJX0 185 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF716A6NP11 495 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 EVPLLA8MZ36 301 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 KLF4O43474 513 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 TPST1O60507 370 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SMPD2O60906 423 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 GOSR1O95249 250 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 TROVE2P10155 538 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 PPP3CBP16298 524 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 CDH2P19022 906 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 PSMB1P20618 241 aaKnown RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 IGHV1-2P23083 117 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 PPIBP23284 216 aaKnown RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SLC6A2P23975 617 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 GTF2E2P29084 291 aaKnown RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 MAGEA8P43361 318 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 FOXG1P55316 489 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 RGS8P57771 180 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 GUCY1A3Q02108 690 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 FAPQ12884 760 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 Q5PR19 223 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SFRP5Q5T4F7 317 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 REEP3Q6NUK4 255 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ADAM5Q6NVV9 412 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SPNS3Q6ZMD2 512 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 TMEM99Q8N816 258 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SMYD1Q8NB12 490 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 KBTBD8Q8NFY9 601 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 OR52E4Q8NGH9 312 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 OR52N5Q8NH56 324 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 C3orf49Q96BT1 292 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ALPK1Q96QP1 1244 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 NAA11Q9BSU3 229 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 TAPBPLQ9BX59 468 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms