RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZC3H12DA2A288 527 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 EIF4E1BA6NMX2 242 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 K7EM74 188 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 HPNP05981 417 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 IL11P20809 199 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 FKBP2P26885 142 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 ELK4P28324 431 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF169Q14929 603 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 PTGES3Q15185 160 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 C3orf33Q6P1S2 294 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 Q6ZS92 163 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 YRDCQ86U90 279 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 SLC22A16Q86VW1 577 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 FBLIM1Q8WUP2 373 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 DDIT4LQ96D03 193 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 SPIN1Q9Y657 262 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 PTPRQQ9UMZ3 2332 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 TRAV36DV7A0A075B6V5 113 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 OR2M5A3KFT3 312 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 ZAR1LA6NP61 321 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 EFCAB9A8MZ26 197 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 TNFAIP8O95379 198 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 CH25HO95992 272 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 IGFBP1P08833 259 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 GGT2P36268 569 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 CD47Q08722 323 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 SELENBP1Q13228 472 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 C1orf140Q5VVS0 124 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 C1QL3Q5VWW1 255 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 FAM98AQ8NCA5 519 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 TAAR8Q969N4 342 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 OR11A1Q9GZK7 315 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF696Q9H7X3 374 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 QPCTLQ9NXS2 382 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 HSPE1-MOB4S4R3N1 261 aa17.07■□□□□ 0.32
PDLIM3-202ENST00000284770 ANKRD11Q6UB99 2663 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 FAM166BA8MTA8 275 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 SOX14O95416 240 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 SAGP10523 405 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 MAGEA5P43359 124 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 RPS5P46782 204 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 B3GALT5-AS1P59052 145 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 PPIAP62937 165 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF74Q16587 644 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 CTU2Q2VPK5 515 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 RASSF6Q6ZTQ3 369 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 KIF18BQ86Y91 864 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 SETD9Q8NE22 299 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 ATP6V1C2Q8NEY4 427 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 LIPHQ8WWY8 451 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 APOL4Q9BPW4 351 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 PTDSS2Q9BVG9 487 aa17.06■□□□□ 0.32
PDLIM3-202ENST00000284770 UNC119BA6NIH7 251 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 LRRN3E7EW58 273 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 ACOT7O00154 380 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 OR7A10O76100 309 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 FUT1P19526 365 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 TPD52P55327 224 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 SYT14P1Q58G82 188 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 WIPI1Q5MNZ9 446 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 LAIR2Q6ISS4 152 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 SLC46A3Q7Z3Q1 461 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 RBMXL3Q8N7X1 1067 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 POTEKPQ9BYX7 375 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF337Q9Y3M9 751 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 MGAQ8IWI9 3026 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 TNRC6AQ8NDV7 1962 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 H3BML4 177 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 OR2T1O43869 369 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 AHSA1O95433 338 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 PEPDP12955 493 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 SLC9A3P48764 834 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 CLK1P49759 484 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 LTBQ06643 244 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 FAM69AQ5T7M9 428 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF786Q8N393 782 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 FAM109AQ8N4B1 249 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 C10orf53Q8N6V4 93 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 OR6S1Q8NH40 331 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 ARL5BQ96KC2 179 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 MOGAT1Q96PD6 335 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 TMEM185BQ9H7F4 350 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 NANSQ9NR45 359 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 IL20Q9NYY1 176 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 B3GNT3Q9Y2A9 372 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 TP53TG5Q9Y2B4 290 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 MYRFQ9Y2G1 1151 aa17.05■□□□□ 0.32
PDLIM3-202ENST00000284770 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 H3BN98 237 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 LINC01387J3KSC0 135 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 MT-ATP6P00846 226 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 BGLAPP02818 100 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 CELA3AP09093 270 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 TFPIP10646 304 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 POU1F1P28069 291 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 NUP107P57740 925 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 RAC1P63000 192 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms