RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 KRT72Q14CN4 511 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 NPTX1Q15818 432 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 NRF1Q16656 503 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 IFI44LQ53G44 452 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 SAMD4BQ5PRF9 694 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 FAM91A1Q658Y4 838 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 TMEM225Q6GV28 225 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 GLYATQ6IB77 296 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 C8orf82Q6P1X6 216 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 TTC33Q6PID6 262 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 CASP12Q6UXS9 341 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 TRPM8Q7Z2W7 1104 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 BTLAQ7Z6A9 289 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 VTCN1Q7Z7D3 282 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 KIF18BQ86Y91 864 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 ZNF100Q8IYN0 542 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 UBE2J2Q8N2K1 259 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 LSMEM1Q8N8F7 131 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 ZNF610Q8N9Z0 462 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 ADAMTS16Q8TE57 1224 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 RNASE6Q93091 150 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 SLC38A4Q969I6 547 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 STARD4Q96DR4 205 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 KTI12Q96EK9 354 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 HSH2DQ96JZ2 352 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 ZNF300Q96RE9 604 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 CDRT15Q96T59 188 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 EPYCQ99645 322 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 WFDC6Q9BQY6 131 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 TACO1Q9BSH4 297 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 ADAM19Q9H013 955 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 FANCFQ9NPI8 374 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 MAGEL2Q9UJ55 1249 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 FOXD3Q9UJU5 478 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 RPS6KA6Q9UK32 745 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 SLC7A7Q9UM01 511 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 NOSIPQ9Y314 301 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 NINQ8N4C6 2090 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 TRAV36DV7A0A075B6V5 113 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 A0A0B4J2E0 115 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 A0A1B0GX12 115 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TRAPPC13A5PLN9 417 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TUBAL3A6NHL2 446 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 LIPT2A6NK58 231 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 A8MXE2 369 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TMEM229AB2RXF0 380 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 MSTNO14793 375 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CHP2O43745 196 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CYTIPO60759 359 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 FMO6PO60774 539 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 MRPL33O75394 65 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 KRT33AO76009 404 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 PDE5AO76074 875 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 OR6A2O95222 327 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 IGHV3-9P01782 118 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 GGT1P19440 569 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 KIR2DL3P43628 341 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CRYBA2P53672 197 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 DLX5P56178 289 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 SELENOWP63302 87 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TFF3Q07654 80 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 C1DQ13901 141 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 ESPL1Q14674 2120 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 SWT1Q5T5J6 900 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 FAM69AQ5T7M9 428 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 ABLIM2Q6H8Q1 611 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 ZNF613Q6PF04 617 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 C5orf46Q6UWT4 87 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 RINLQ6ZS11 566 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 NUFIP2Q7Z417 695 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 GDF7Q7Z4P5 450 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 GALNT5Q7Z7M9 940 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TMEM200AQ86VY9 491 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CYP4Z1Q86W10 505 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CCDC103Q8IW40 242 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 TMEM99Q8N816 258 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 RBM15BQ8NDT2 890 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 OR4D11Q8NGI4 311 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 STK35Q8TDR2 534 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 GEMIN6Q8WXD5 167 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 CCDC124Q96CT7 223 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 SLC41A3Q96GZ6 507 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 ZC3HAV1LQ96H79 300 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 NSMCE2Q96MF7 247 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 PSD2Q9BQI7 771 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 FNDC11Q9BVV2 318 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 ASPNQ9BXN1 380 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 RSPO3Q9BXY4 272 aaPredicted RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 POTEKPQ9BYX7 375 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 C12orf10Q9HB07 376 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 MCCC2Q9HCC0 563 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 RHCGQ9UBD6 479 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 ABCD2Q9UBJ2 740 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 SAMD4AQ9UPU9 718 aaKnown RBP5.82□□□□□ -1.48
CD44-204ENST00000279452 TRAPPC4Q9Y296 219 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 CNTRLQ7Z7A1 2325 aa5.82□□□□□ -1.48
CD44-204ENST00000279452 IGKV1D-42A0A075B6H8 117 aa5.81□□□□□ -1.48
CD44-204ENST00000279452 A0A087WUJ7 227 aa5.81□□□□□ -1.48
CD44-204ENST00000279452 ZNF814B7Z6K7 855 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms