RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ART5Q96L15 291 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 WDR92Q96MX6 357 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR51V1Q9H2C8 321 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 PPIL3Q9H2H8 161 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 GAREM1Q9H706 876 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 MAT2BQ9NZL9 334 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 NOTOA8MTQ0 251 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 PEX12O00623 359 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 DVL2O14641 736 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 HYAL3O43820 417 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 REM1O75628 298 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 EML2O95834 649 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 OR2T7P0C7T2 308 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 SDHBP21912 280 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 AGFG1P52594 562 aaKnown RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 MGAT2Q10469 447 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 GGTLC2Q14390 218 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ZNF782Q6ZMW2 699 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 OR2T27Q8NH04 317 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 MRPL48Q96GC5 212 aaKnown RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 TBX5Q99593 518 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ACTR10Q9NZ32 417 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CEP295Q9C0D2 2601 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 A0A1W2PR77 199 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 E9PI62 339 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 J3QLW9 94 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CTDSPLO15194 276 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 FGF17O60258 216 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CPNE3O75131 537 aaKnown RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 PAHP00439 452 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 SYPP08247 313 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ZNF19P17023 458 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 NOS3P29474 1203 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CCR5P51681 352 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 SLC16A1P53985 500 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 E2F1Q01094 437 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 SLC3A1Q07837 685 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CRMP1Q14194 572 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 NTRK2Q16620 822 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 CCDC58Q4VC31 144 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 NANOGNBQ7Z5D8 188 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 RABEPKQ7Z6M1 372 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 GPR135Q8IZ08 494 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 GHSRQ92847 366 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 OR2M2Q96R28 347 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 RANBP3Q9H6Z4 567 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-201ENST00000277198 EMC7Q9NPA0 242 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 ING4Q9UNL4 249 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 RNF215Q9Y6U7 377 aa11.87□□□□□ -0.51
C9orf3-201ENST00000277198 MDC1Q14676 2089 aaKnown RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 TMEM131Q92545 1883 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 POM121BA6NF01 834 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 SLC9B1P1A6NJY1 282 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 GSTZ1O43708 216 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 ITGA10O75578 1167 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 RFPL3O75679 317 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 FUT1P19526 365 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 AK4P27144 223 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 GABRA3P34903 492 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 ACTR1BP42025 376 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 OR12D2P58182 307 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 ACTR1AP61163 376 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 SNRPNP63162 240 aaKnown RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 PRRT3Q5FWE3 981 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 CD276Q5ZPR3 534 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 FAAH2Q6GMR7 532 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 LINC00114Q6XXX2 140 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 RNF44Q7L0R7 432 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 OVCH1Q7RTY7 1134 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 ZNF550Q7Z398 422 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 PIP4P1Q86T03 277 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 C17orf47Q8NEP4 570 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 BAHD1Q8TBE0 780 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 HAVCR2Q8TDQ0 301 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 SMIM19Q96E16 107 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 LMF2Q9BU23 707 aaKnown RBP11.86□□□□□ -0.51
C9orf3-201ENST00000277198 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 MED28Q9H204 178 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 GHITMQ9H3K2 345 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 GALNT9Q9HCQ5 603 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 PCNX2A6NKB5 2137 aa11.86□□□□□ -0.51
C9orf3-201ENST00000277198 A0A0A6YYJ9 748 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 A0A1B0GWA3 101 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 C2orf74A8MZ97 194 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 H0YGG7 62 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ZNF749O43361 778 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 LANCL1O43813 399 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 GALR3O60755 368 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms