RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ADGRG3Q86Y34 549 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 SARGQ9BW04 601 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 IER3IP1Q9Y5U9 82 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 LTBP2Q14767 1821 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 FAM171A2A8MVW0 826 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 CTDSPLO15194 276 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 DCTDP32321 178 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 LINC00303Q3SY05 128 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 OVCH1Q7RTY7 1134 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 PAQR7Q86WK9 346 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 SMARCD2Q92925 531 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 CAPNS2Q96L46 248 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 LIN7BQ9HAP6 207 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 NPDC1Q9NQX5 325 aaPredicted RBP25.28■■□□□ 1.64
CBX4-201ENST00000269397 C2orf42Q9NWW7 574 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 C19orf53Q9UNZ5 99 aaPredicted RBP25.28■■□□□ 1.64
CBX4-201ENST00000269397 IFNGP01579 166 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 PROS1P07225 676 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 METTL11BQ5VVY1 283 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 OR5M10Q6IEU7 315 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 KIAA1324Q6UXG2 1013 aaKnown RBP25.27■■□□□ 1.64
CBX4-201ENST00000269397 CXorf58Q96LI9 332 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 TOX2Q96NM4 488 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 PCDHGA5Q9Y5G8 931 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 VCANP13611 3396 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 SLC6A6P31641 620 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 OC90Q02509 493 aaPredicted RBP25.27■■□□□ 1.64
CBX4-201ENST00000269397 FBXO42Q6P3S6 717 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 BAIAP2L2Q6UXY1 529 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 MEIOBQ8N635 442 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 TMEM52Q8NDY8 209 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 OR52B4Q8NGK2 314 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 OR6K6Q8NGW6 343 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 ZPLD1Q8TCW7 415 aa25.27■■□□□ 1.64
CBX4-201ENST00000269397 MRPS2Q9Y399 296 aaKnown RBP25.27■■□□□ 1.64
CBX4-201ENST00000269397 MUC22E2RYF6 1773 aaPredicted RBP25.26■■□□□ 1.63
CBX4-201ENST00000269397 CHD9Q3L8U1 2897 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 IFITM5A6NNB3 132 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 SLC35G6P0C7Q6 338 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 HTR4Q13639 388 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 FAM69AQ5T7M9 428 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 C3P1Q6ZMU1 363 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 SLC2A12Q8TD20 617 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 ZNF296Q8WUU4 475 aaPredicted RBP25.26■■□□□ 1.63
CBX4-201ENST00000269397 WBP1Q96G27 269 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 TIMM29Q9BSF4 260 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 SEMA4CQ9C0C4 833 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 C12orf10Q9HB07 376 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 DAPP1Q9UN19 280 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 A0A1B0GVT2 93 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 MCIDASD6RGH6 385 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 L7N2F9 121 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 FGF17O60258 216 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 KRT33AO76009 404 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 EMDP50402 254 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 POU4F2Q12837 409 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 BTN1A1Q13410 526 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 FHL5Q5TD97 284 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 ARHGAP11AQ6P4F7 1023 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 UXS1Q8NBZ7 420 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 NANSQ9NR45 359 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 KLHL9Q9P2J3 617 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 NCDNQ9UBB6 729 aa25.26■■□□□ 1.63
CBX4-201ENST00000269397 CTSVO60911 334 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 CT62P0C5K7 136 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 OR2T7P0C7T2 308 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 PSMA6P60900 246 aaKnown RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 FAM78AQ5JUQ0 283 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 RPL22L1Q6P5R6 122 aaKnown RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 OR5T3Q8NGG3 340 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 OR2T27Q8NH04 317 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 NMNAT3Q96T66 252 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 SDHAF2Q9NX18 166 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 ZNF346Q9UL40 294 aaKnown RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 DENND4AQ7Z401 1863 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 A0A0B4J2E0 115 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 A0A1B0GX12 115 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 hCG_1807616A0A1W2PRN6 198 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 HOXD4P09016 255 aaPredicted RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 CTNNB1P35222 781 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 ACTA2P62736 377 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 ACTG2P63267 376 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 CST6Q15828 149 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 ALG10BQ5I7T1 473 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 NHLRC3Q5JS37 347 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 C1orf216Q8TAB5 229 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 SYNPRQ8TBG9 265 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 FCAMRQ8WWV6 532 aa25.25■■□□□ 1.63
CBX4-201ENST00000269397 ZNF707Q96C28 371 aaPredicted RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 TSPAN10Q9H1Z9 355 aaPredicted RBP25.25■■□□□ 1.63
CBX4-201ENST00000269397 A0A1B0GUH1 482 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 H3BSH0 61 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 GABARAPH6UMI1 98 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 AK4P27144 223 aaPredicted RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 DPP4P27487 766 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 TLX1P31314 330 aaPredicted RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 KIAA1024LP59773 190 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 PSRC1Q6PGN9 363 aaPredicted RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 ALKAL2Q6UX46 152 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 ZBTB44Q8NCP5 570 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms