RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ACP2P11117 423 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 STOMP27105 288 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 GPR85P60893 370 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 SIRPAP78324 504 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 SLC16A14Q7RTX9 510 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 ABCG5Q9H222 651 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 MRPS2Q9Y399 296 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 R4GN57 208 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 HMGN4O00479 90 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 MPIG6BO95866 241 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 GNRHRP30968 328 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 MPLP40238 635 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 EIF1P41567 113 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 ZFAND2BQ8WV99 257 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 GABRG3Q99928 467 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 HCAR1Q9BXC0 346 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 POTEKPQ9BYX7 375 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 CALHM2Q9HA72 323 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 IGLV3-16A0A075B6K0 115 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 TTLL8A6PVC2 850 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 MRPS14O60783 128 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 PVALBP20472 110 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 NPR2P20594 1047 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 IL32P24001 234 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 TMEM244Q5VVB8 128 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 CMIPQ8IY22 773 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 SMRP1Q8NCR6 262 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 NMNAT3Q96T66 252 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 NUDT15Q9NV35 164 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 NOSIPQ9Y314 301 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 SPEF1Q9Y4P9 236 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 FAM230AA0A1W2PPH8 454 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 OR2W5A6NFC9 320 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 FAM166BA8MTA8 275 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 GPR3P46089 330 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 STT3AP46977 705 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 RGS6P49758 472 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 BIDP55957 195 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 EMX1Q04741 257 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 BAIAP2L2Q6UXY1 529 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 SLC35D2Q76EJ3 337 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 KMT5CQ86Y97 462 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 TMEM102Q8N9M5 508 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 MEPEQ9NQ76 525 aaPredicted RBP12.68□□□□□ -0.38
NPC1-201ENST00000269228 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 BABAM2Q9NXR7 383 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 PCDHGA3Q9Y5H0 932 aa12.68□□□□□ -0.38
NPC1-201ENST00000269228 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 NRG2O14511 850 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 PPM1DO15297 605 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 CAPNS1P04632 268 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 TEAD1P28347 426 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 PSMA6P60900 246 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 ARSJQ5FYB0 599 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 OR2G6Q5TZ20 316 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 C1orf210Q8IVY1 113 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ANKRD53Q8N9V6 530 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ANXA3P12429 323 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 RAB3AP20336 220 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 CFL1P23528 166 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 CRHBPP24387 322 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 PCBD1P61457 104 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 NCCRP1Q6ZVX7 275 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 SPRED1Q7Z699 444 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 OR5M1Q8NGP8 315 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ACTR6Q9GZN1 396 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 KCNIP3Q9Y2W7 256 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ANKRD30BLA7E2S9 258 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 A8MVM7 634 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 BCAS1O75363 584 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 MAP2K3P46734 347 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 FAM53BQ14153 422 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 CPEB2Q7Z5Q1 589 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 OR9K2Q8NGE7 335 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 MFSD8Q8NHS3 518 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ALG12Q9BV10 488 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 SLC25A37Q9NYZ2 338 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ZNF195O14628 629 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 PIP5K1CO60331 668 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms