RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ACVR2AP27037 513 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 YAP1P46937 504 aaKnown RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 DIO1P49895 249 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TPD52P55327 224 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 CARD18P57730 90 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 CSNK2A1P68400 391 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 PRKCDQ05655 676 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 MFSD13AQ14CX5 517 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 ACSF3Q4G176 576 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 ZNF770Q6IQ21 691 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TMPRSS11FQ6ZWK6 438 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 LINC00471Q8N535 108 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 ADPRHL1Q8NDY3 354 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 OR10D3Q8NH80 312 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TMEM239Q8WW34 195 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 OSTF1Q92882 214 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 WNT2BQ93097 391 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 CPNE4Q96A23 557 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-201ENST00000265304 DMRTA2Q96SC8 542 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 EPYCQ99645 322 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 VKORC1Q9BQB6 163 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 PSD2Q9BQI7 771 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 KLHL4Q9C0H6 718 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 NTN4Q9HB63 628 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 GP6Q9HCN6 339 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TIGARQ9NQ88 270 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TNFRSF10DQ9UBN6 386 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 DNAJB9Q9UBS3 223 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 FAM215AQ9Y5M1 114 aa12.79□□□□□ -0.36
SSBP1-201ENST00000265304 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SH3PXD2BA1X283 911 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 MBD3L4A6NDZ8 208 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 MBD3L3A6NE82 208 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 MBD3L5A6NJ08 208 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 EIF4E1BA6NMX2 242 aaKnown RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SULT2B1O00204 365 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 ZNHIT1O43257 154 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 KLF4O43474 513 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 DIRAS1O95057 198 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 BGLAPP02818 100 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 ABOP16442 354 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SFTPDP35247 375 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 IDUAP35475 653 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 TIMP3P35625 211 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 P2RY4P51582 365 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 UGT2B15P54855 530 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SLC35A1P78382 337 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 LTBQ06643 244 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 PDK3Q15120 406 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 C3AR1Q16581 482 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 HBMQ6B0K9 141 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 NHLRC1Q6VVB1 395 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 SCAIQ8N9R8 606 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 MBD3L2Q8NHZ7 208 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 TMEM255BQ8WV15 326 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 NRBF2Q96F24 287 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 OR5B2Q96R09 309 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 TMEM185BQ9H7F4 350 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 RNF122Q9H9V4 155 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 RALYQ9UKM9 306 aaKnown RBP12.78□□□□□ -0.36
SSBP1-201ENST00000265304 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
SSBP1-201ENST00000265304 A0A1W2PNR3 127 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 TNFSF11O14788 317 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 CLOCKO15516 846 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 CXCL13O43927 109 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ENTPD5O75356 428 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-201ENST00000265304 GADD45GO95257 159 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 AHSA1O95433 338 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 TPOP07202 933 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 FCGR1AP12314 374 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 RRM2P31350 389 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-201ENST00000265304 SLC16A1P53985 500 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 SEC23BQ15437 767 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ATP6AP1Q15904 470 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ZNF74Q16587 644 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 C1orf185Q5T7R7 199 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 POMZP3Q6PJE2 187 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 CD163Q86VB7 1156 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 ATCAYQ86WG3 371 aa12.77□□□□□ -0.37
SSBP1-201ENST00000265304 SLC43A2Q8N370 569 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms