RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 P2RY8Q86VZ1 359 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 P3H2Q8IVL5 708 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 UBE2J2Q8N2K1 259 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 ZNF611Q8N823 705 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 BBS10Q8TAM1 723 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 STON2Q8WXE9 905 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 RABEP2Q9H5N1 569 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 ESRP2Q9H6T0 727 aaKnown RBP14.2□□□□□ -0.14
USE1-201ENST00000263897 PARPBPQ9NWS1 579 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 VAPAQ9P0L0 249 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 LIPT2A6NK58 231 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 A8MVM7 634 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 C5orf58C9J3I9 102 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 IGHV3-9P01782 118 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 GPIP06744 558 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 CD3EP07766 207 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 ARAFP10398 606 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 GPX2P18283 190 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 GGT1P19440 569 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 NCF2P19878 526 aaPredicted RBP14.19□□□□□ -0.14
USE1-201ENST00000263897 IDUAP35475 653 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 BNIP2Q12982 314 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 CEACAM7Q14002 265 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 SLC17A1Q14916 467 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 TIMM23BQ5SRD1 257 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 SSX8Q7RTT4 187 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 SERPINA11Q86U17 422 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 C10orf111Q8N326 155 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 TMEM99Q8N816 258 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 LILRB1Q8NHL6 650 aaPredicted RBP14.19□□□□□ -0.14
USE1-201ENST00000263897 SLC35B4Q969S0 331 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 MUCL1Q96DR8 90 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 THOC1Q96FV9 657 aaKnown RBP14.19□□□□□ -0.14
USE1-201ENST00000263897 RSPO3Q9BXY4 272 aaPredicted RBP14.19□□□□□ -0.14
USE1-201ENST00000263897 ASB6Q9NWX5 421 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 RNF115Q9Y4L5 304 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 FLVCR1Q9Y5Y0 555 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 NF1P21359 2839 aa14.19□□□□□ -0.14
USE1-201ENST00000263897 DPRXA6NFQ7 191 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 OR5H1A6NKK0 313 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 EVPLLA8MZ36 301 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 ADSLP30566 484 aaPredicted RBP14.18□□□□□ -0.14
USE1-201ENST00000263897 CDK6Q00534 326 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 PPA1Q15181 289 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 OR7A5Q15622 319 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 STK11Q15831 433 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 OTUD3Q5T2D3 398 aaPredicted RBP14.18□□□□□ -0.14
USE1-201ENST00000263897 GCNT6Q5T4J0 391 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 REEP3Q6NUK4 255 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 PRSS57Q6UWY2 283 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 DLEU7Q6UYE1 221 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 ATG4DQ86TL0 474 aaPredicted RBP14.18□□□□□ -0.14
USE1-201ENST00000263897 NFKBIDQ8NI38 313 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 AKAP1Q92667 903 aaKnown RBP eCLIP14.18□□□□□ -0.14
USE1-201ENST00000263897 C3orf49Q96BT1 292 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 SF3B5Q9BWJ5 86 aaKnown RBP14.18□□□□□ -0.14
USE1-201ENST00000263897 SLC9A8Q9Y2E8 581 aa14.18□□□□□ -0.14
USE1-201ENST00000263897 NIPBLQ6KC79 2804 aaeCLIP14.17□□□□□ -0.14
USE1-201ENST00000263897 CIB4A0PJX0 185 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 CCT8L1PA6NM43 557 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 CLOCKO15516 846 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 FRS3O43559 492 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 EDF1O60869 148 aaKnown RBP14.17□□□□□ -0.14
USE1-201ENST00000263897 TMCC2O75069 709 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 NPIPB7O75200 414 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 SASH3O75995 380 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 AKR7A3O95154 331 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 PRKAR1BP31321 381 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 HOXC5Q00444 222 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 BSPH1Q075Z2 132 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 FAPQ12884 760 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 Q5PR19 223 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 C1orf140Q5VVS0 124 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 ZIC4Q8N9L1 334 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 TMEM171Q8WVE6 324 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 C18orf12Q96KH6 178 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 MUS81Q96NY9 551 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 TAPBPLQ9BX59 468 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 GSX2Q9BZM3 304 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 GSX1Q9H4S2 264 aaPredicted RBP14.17□□□□□ -0.14
USE1-201ENST00000263897 IKZF5Q9H5V7 419 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 PIF1Q9H611 641 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 TMEM38AQ9H6F2 299 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 MALT1Q9UDY8 824 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 DCTN4Q9UJW0 460 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 CORO2BQ9UQ03 480 aa14.17□□□□□ -0.14
USE1-201ENST00000263897 PLCE1Q9P212 2302 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 AQP7P3A6NL99 342 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 TMEM229AB2RXF0 380 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 PDLIM1O00151 329 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 RAD51DO75771 328 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 PAX1P15863 534 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 FOXG1P55316 489 aaPredicted RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 ADRM1Q16186 407 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 GABRA6Q16445 453 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 RUNDC3AQ59EK9 446 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 TMEM225Q6GV28 225 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 DHRS4L2Q6PKH6 230 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 CASP12Q6UXS9 341 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 KRT73Q86Y46 540 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms