RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PLA2G7Q13093 441 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 DOK4Q8TEW6 326 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 OR52D1Q9H346 318 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 TXNL4BQ9NX01 149 aaKnown RBP16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 T-ENOLP0DO92 83 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 SFRP5Q5T4F7 317 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 TRAV27A0A087WT01 109 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 MED6O75586 246 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 NFATC4Q14934 902 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 LCN10Q6JVE6 187 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 RPL22L1Q6P5R6 122 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC41A2Q96JW4 573 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 SNCGO76070 127 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 RTP3Q9BQQ7 232 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 CHRM4P08173 479 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 CLDN6P56747 220 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 PTGESO14684 152 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF92Q03936 586 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 POU4F3Q15319 338 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 P2RY14Q15391 338 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 OR5K2Q8NHB8 316 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 RSPRY1Q96DX4 576 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 HRH4Q9H3N8 390 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 ETV7Q9Y603 341 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 TRAPPC2LH3BP13 241 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 SERPINA2P20848 420 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF761Q86XN6 746 aaPredicted RBP16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 IL1F10Q8WWZ1 152 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 OR1E3Q8WZA6 343 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 MROH6A6NGR9 719 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 HBE1P02100 147 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 APOA2P02652 100 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 RBMS3Q6XE24 437 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 MSTNO14793 375 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 DCAF7P61962 342 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 GAREM2Q75VX8 874 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 OR4F15Q8NGB8 312 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 UHRF2Q96PU4 802 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 APOOQ9BUR5 198 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 ACAD8Q9UKU7 415 aa16.32■□□□□ 0.2
NOTCH3-201ENST00000263388 TMEM82A0PJX8 343 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 METTL15A6NJ78 407 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GABRB3P28472 473 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 C21orf33P30042 268 aaPredicted RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC30A7Q8NEW0 376 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 PIAS3Q9Y6X2 628 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 UBE2KP61086 200 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 SQSTM1Q13501 440 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF74Q16587 644 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 DEFB110Q30KQ9 67 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ADOQ96SZ5 270 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 CBLCQ9ULV8 474 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 RPS10-NUDT3A0A1W2PQS6 291 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 J3QR89 54 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GPRIN2O60269 458 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 PSMB10P40306 273 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ECI1P42126 302 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 RPS10P46783 165 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 SRPXP78539 464 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 B3GLCTQ6Y288 498 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 NXF5Q9H1B4 397 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 DOCK6Q96HP0 2047 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GLSO94925 669 aaPredicted RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 HOXC13P31276 330 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 XCR1P46094 333 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 HTR6P50406 440 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ARG2P78540 354 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 RANGRFQ9HD47 186 aaPredicted RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GPR39O43194 453 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 SNRNP70P08621 437 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 CBLL1Q75N03 491 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC7A5P1Q8MH63 180 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF439Q8NDP4 499 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 LURAP1Q96LR2 239 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 PAN3Q58A45 887 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 MRPL2Q5T653 305 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 OR52R1Q8NGF1 315 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 PDLIM5Q96HC4 596 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 CTSAP10619 480 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 TNFSF8P32971 234 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 BMPR1AP36894 532 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 HNRNPA1L2Q32P51 320 aaKnown RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 MKXQ8IYA7 352 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 TSSK2Q96PF2 358 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 NIPSNAP3BQ9BS92 247 aa16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 VSX1Q9NZR4 365 aaPredicted RBP16.31■□□□□ 0.2
NOTCH3-201ENST00000263388 GYPBP06028 91 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 CPMP14384 443 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 P2RY2P41231 377 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ATP1B3P54709 279 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ANKRD19PQ9H560 264 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 DIDO1Q9BTC0 2240 aaKnown RBP16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 PI4KAP42356 2102 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms