RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RERGQ96A58 199 aaPredicted RBP8.4□□□□□ -1.07
MSH4-201ENST00000263187 RAB11FIP5Q9BXF6 653 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 ULBP3Q9BZM4 244 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 SRA1Q9HD15 236 aaKnown RBP8.4□□□□□ -1.07
MSH4-201ENST00000263187 ZNF224Q9NZL3 707 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 U3KQ87 197 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 CELSR3Q9NYQ7 3312 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 HEATR5AQ86XA9 2040 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 TVP23AA6NH52 213 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ZNF593O00488 134 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 GPR171O14626 319 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 RGS11O94810 467 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 LYPD3O95274 346 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 UCHL1P09936 223 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 TMIGD3P0DMS9 266 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 COL9A1P20849 921 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 RPS15AP62244 130 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 PLA2G7Q13093 441 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 LGALSLQ3ZCW2 172 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 TMEM240Q5SV17 173 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 GARNL3Q5VVW2 1013 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 KIRREL2Q6UWL6 708 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ZNF764Q96H86 408 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 AHCYL2Q96HN2 611 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 DDOQ99489 341 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 CCDC3Q9BQI4 270 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 KCNK15Q9H427 330 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ANKRD19PQ9H560 264 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 MPDZO75970 2070 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 PRR32B1ATL7 298 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ARPC1BO15143 372 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 KHDRBS3O75525 346 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 SLC22A5O76082 557 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SIX6O95475 246 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 MPC2O95563 127 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 F13BP05160 661 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ANXA7P20073 488 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 ACSM1Q08AH1 577 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 GPM6BQ13491 265 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 TMEM44Q2T9K0 475 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 FTMTQ8N4E7 242 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 OR52B4Q8NGK2 314 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 GAS2L1Q99501 681 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 C2orf42Q9NWW7 574 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 HRASLS2Q9NWW9 162 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ACTR10Q9NZ32 417 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 LRIT1Q9P2V4 623 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 GTF2A1LQ9UNN4 478 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 C19orf53Q9UNZ5 99 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 SLC22A7Q9Y694 548 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 A0A0A6YYC8 382 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 OR6C68A6NDL8 312 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 I3L1I5 382 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 MAS1P04201 325 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 OR8G3PP0DMU2 310 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 FCARP24071 287 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 RAD52P43351 418 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 NRG3P56975 720 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SIRPAP78324 504 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 GSG1Q2KHT4 349 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 HSD17B12Q53GQ0 312 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 TMEM196Q5HYL7 178 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 PRAMEF8Q5VWM4 474 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 PRAMEF7Q5VXH5 474 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ZNF776Q68DI1 518 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 DMKNQ6E0U4 476 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 RTL4Q6ZR62 310 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SLC35F2Q8IXU6 374 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 RPLP0P6Q8NHW5 317 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SCMH1Q96GD3 660 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SERINC2Q96SA4 455 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ELF4Q99607 663 aaPredicted RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 KIR3DX1Q9H7L2 352 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 MYEF2Q9P2K5 600 aaKnown RBP8.39□□□□□ -1.07
MSH4-201ENST00000263187 RPS6KB2Q9UBS0 482 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ZNF69Q9UC07 566 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 ST6GALNAC2Q9UJ37 374 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 SPEF1Q9Y4P9 236 aa8.39□□□□□ -1.07
MSH4-201ENST00000263187 LINC01565O15544 149 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 FMO6PO60774 539 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 ALDOBP05062 364 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 CFL1P23528 166 aaKnown RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 DCTDP32321 178 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 ADH7P40394 386 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 GBX2P52951 348 aaPredicted RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 NANOS3P60323 173 aaKnown RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 ZP1P60852 638 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 YOD1Q5VVQ6 348 aaPredicted RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 SIGIRRQ6IA17 410 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 APOOLQ6UXV4 268 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 OR4C3Q8NH37 302 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 MOSPD2Q8NHP6 518 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 FAM60AQ9NP50 221 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 PHF11Q9UIL8 331 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 H0YC42 278 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 PIN1P1O15428 100 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 PTP4A3O75365 173 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms