RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SLC25A15Q9Y619 301 aa10.78□□□□□ -0.68
TRAF4-202ENST00000262396 NSD1Q96L73 2696 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 CSPG4Q6UVK1 2322 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GOLGA8QA0A0J9YX86 632 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GOLGA8OA6NCC3 632 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 AGAP5A6NIR3 686 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 E7EQL1 145 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GOLGA8NF8WBI6 632 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 BCAS1O75363 584 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 PGRP06401 933 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 SLC16A1P53985 500 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 CEACAM7Q14002 265 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GABRA6Q16445 453 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GSTA3Q16772 222 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 MRPL2Q5T653 305 aaKnown RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 ATG16L1Q676U5 607 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF544Q6NX49 715 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 CXXC5Q7LFL8 322 aaKnown RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 C17orf78Q8N4C9 275 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GLB1L3Q8NCI6 653 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 FAM71CQ8NEG0 241 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 OR52P1PQ8NH57 321 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 FAM168AQ92567 244 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 HTRA1Q92743 480 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 GRIP2Q9C0E4 1043 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 MEAF6Q9HAF1 191 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 ADPRHL2Q9NX46 363 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 NKIRAS1Q9NYS0 192 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 RPS6KB2Q9UBS0 482 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 MALT1Q9UDY8 824 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 DCTN4Q9UJW0 460 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 FKBP7Q9Y680 259 aa10.77□□□□□ -0.69
TRAF4-202ENST00000262396 FN1P02751 2386 aaKnown RBP10.77□□□□□ -0.69
TRAF4-202ENST00000262396 RAI1Q7Z5J4 1906 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-202ENST00000262396 VSTM5A8MXK1 200 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 C5orf58C9J3I9 102 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLCO1B7G3V0H7 640 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLC22A3O75751 556 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 AKR7A3O95154 331 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 CD8AP01732 235 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 IL6P05231 212 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 BCHEP06276 602 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 CHRM4P08173 479 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLC25A16P16260 332 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 EPHA3P29320 983 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 MPGP29372 298 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 CRISP3P54108 245 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 PHC1P78364 1004 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 IRX1P78414 480 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SPOCK1Q08629 439 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 BST1Q10588 318 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 FUT5Q11128 374 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 C6orf10Q5SRN2 563 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 PAQR6Q6TCH4 344 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 POMGNT2Q8NAT1 580 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-202ENST00000262396 RNF217Q8TC41 542 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 FBXO17Q96EF6 278 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 AURKBQ96GD4 344 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-202ENST00000262396 MUS81Q96NY9 551 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SORT1Q99523 831 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 BEX2Q9BXY8 128 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLC38A1Q9H2H9 487 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 MANSC1Q9H8J5 431 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLC17A5Q9NRA2 495 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 SLC7A10Q9NS82 523 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 AIG1Q9NVV5 245 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 THAP1Q9NVV9 213 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM45AQ9NWC5 275 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 FLVCR1Q9Y5Y0 555 aa10.76□□□□□ -0.69
TRAF4-202ENST00000262396 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-202ENST00000262396 TLN2Q9Y4G6 2542 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 IGHV4-30-2A0A087WSY4 118 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF587BE7ETH6 402 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 KLF11O14901 512 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 HDAC3O15379 428 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 AHSA1O95433 338 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ITGA5P08648 1049 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 CSF3P09919 207 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 GKN3PP0CG01 181 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 IMPDH2P12268 514 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 IDO1P14902 403 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 APOBEC3AP31941 199 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 CDKN2CP42773 168 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 DSTNP60981 165 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SNRPD2P62316 118 aaKnown RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 EPS8Q12929 822 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SLC17A1Q14916 467 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ZSWIM7Q19AV6 140 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 TSPO2Q5TGU0 170 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 PRAMEF8Q5VWM4 474 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 PRAMEF7Q5VXH5 474 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 WBP2NLQ6ICG8 309 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 OGFOD2Q6N063 350 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SLC46A3Q7Z3Q1 461 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 MREGQ8N565 214 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM99Q8N816 258 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 OR9K2Q8NGE7 335 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms