RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CD300LFQ8TDQ1 290 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 TBCKQ8TEA7 893 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 CASD1Q96PB1 797 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
CCDC54-201ENST00000261058 NPAS2Q99743 824 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 SLC29A1Q99808 456 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 APOL2Q9BQE5 337 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 ACBD6Q9BR61 282 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 ANKRD60Q9BZ19 345 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 ZSCAN16Q9H4T2 348 aaPredicted RBP3.38□□□□□ -1.87
CCDC54-201ENST00000261058 SMYD3Q9H7B4 428 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 ONECUT1Q9UBC0 465 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 SEC14L3Q9UDX4 400 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 FZR1Q9UM11 496 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 B9D1Q9UPM9 204 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 IFT52Q9Y366 437 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 MYO15BQ96JP2 1530 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 POGZQ7Z3K3 1410 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 MAP3K5Q99683 1374 aa3.38□□□□□ -1.87
CCDC54-201ENST00000261058 TRAV9-2A0A087WT02 112 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 RNF13O43567 381 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 UPK3AO75631 287 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CABYRO75952 493 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CDK14O94921 469 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PIGRP01833 764 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 RPS17P08708 135 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SNRPAP09012 282 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SLC35G4P0C7Q5 338 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 UMPSP11172 480 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PVRP15151 417 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 EIF2S2P20042 333 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PTNP21246 168 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 OTX1P32242 354 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 NAMPTP43490 491 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 STX17P56962 302 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 C21orf59P57076 290 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 MRPS6P82932 125 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SCRN3Q0VDG4 424 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 MERTKQ12866 999 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 FADDQ13158 208 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PON2Q15165 354 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 Q1RN00 199 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 MICAQ29983 383 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TEX44Q53QW1 395 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SLC25A30Q5SVS4 291 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TMEM225Q6GV28 225 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 ASPHD2Q6ICH7 369 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PRR5LQ6MZQ0 368 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TTC23LQ6PF05 361 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 BAIAP2L2Q6UXY1 529 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 C16orf62Q7Z3J2 963 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 NET1Q7Z628 596 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 P2RY8Q86VZ1 359 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TTLQ8NG68 377 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 OR5D13Q8NGL4 314 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 KCNG3Q8TAE7 436 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 PNPT1Q8TCS8 783 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 GPX8Q8TED1 209 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SPRYD4Q8WW59 207 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 RAB1CQ92928 201 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 ADIPOR1Q96A54 375 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CCDC42Q96M95 316 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 C9orf85Q96MD7 179 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 VPS35Q96QK1 796 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CITED1Q99966 193 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 OMDQ99983 421 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 C6orf62Q9GZU0 229 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 IL22Q9GZX6 179 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 TRIM45Q9H8W5 580 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CALHM2Q9HA72 323 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 SLC2A8Q9NY64 477 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 STOX2Q9P2F5 926 aaPredicted RBP3.37□□□□□ -1.87
CCDC54-201ENST00000261058 P2RX2Q9UBL9 471 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CTSFQ9UBX1 484 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 FADS3Q9Y5Q0 445 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 CACNG2Q9Y698 323 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 MAD1L1Q9Y6D9 718 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 NISCHQ9Y2I1 1504 aa3.37□□□□□ -1.87
CCDC54-201ENST00000261058 A0A0J9YVX5 310 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TMEM120BA0PK00 339 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SYCE1LA8MT33 242 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TM9SF1O15321 606 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CLPXO76031 633 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 LCA5LO95447 670 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CA3P07451 260 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HSMCR30P0CW71 290 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 OR1D4P47884 311 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 STK19P49842 368 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HMGCS2P54868 508 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PPIAP62937 165 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 FGL1Q08830 312 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZNF239Q16600 458 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PPP1R3AQ16821 1122 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 XKR7Q5GH72 579 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MLIPQ5VWP3 458 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms