RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 EDNRAP25101 427 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 PPP1CAP62136 330 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 EML5Q05BV3 1969 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 FGFBP1Q14512 234 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 ZNF141Q15928 474 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 TMEM31Q5JXX7 168 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 UNQ9370/PRO34162Q6UXP9 181 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 BAIAP2L2Q6UXY1 529 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 PRSS45Q7RTY3 260 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 NPEPL1Q8NDH3 523 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 OR9A4Q8NGU2 314 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 MRGPRX1Q96LB2 322 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 C7orf50Q9BRJ6 194 aaKnown RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 MKKSQ9NPJ1 570 aaPredicted RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 NRIP3Q9NQ35 241 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 NCDNQ9UBB6 729 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 MGAT4AQ9UM21 535 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 COPS3Q9UNS2 423 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 LRP4O75096 1905 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 TRABD2BA6NFA1 517 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 HRKO00198 91 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 GSTZ1O43708 216 aaPredicted RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 ANXA3P12429 323 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 CXCL3P19876 107 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 TFF2Q03403 129 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 LGALS3BPQ08380 585 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 SNTB2Q13425 540 aaKnown RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 GSG1Q2KHT4 349 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 HSD17B12Q53GQ0 312 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 ZNF782Q6ZMW2 699 aaPredicted RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 DPY19L2P2Q6ZN68 376 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 TIGD4Q8IY51 512 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 RCBTB1Q8NDN9 531 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 ZNF671Q8TAW3 534 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 C17orf50Q8WW18 174 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 VSTM2LQ96N03 204 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 GPR137Q96N19 417 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 NMNAT3Q96T66 252 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 DDOQ99489 341 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 DTX4Q9Y2E6 619 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 PCDHGA9Q9Y5G4 932 aaKnown RBP13.98□□□□□ -0.17
DDX56-201ENST00000258772 KNL1Q8NG31 2342 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 MPDZO75970 2070 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 FAM221BA6H8Z2 402 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 NPIPB9F8W1W9 429 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 IMPA2O14732 288 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CTDSPLO15194 276 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 TSC22D2O75157 780 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CTSBP07858 339 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 H2AFB2P0C5Z0 115 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 RPL4P36578 427 aaKnown RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 PSMB10P40306 273 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 OR3A3P47888 321 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 RAG2P55895 527 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 P2RX3P56373 397 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 YPEL5P62699 121 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 UBE2IP63279 158 aaKnown RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 SRSF5Q13243 272 aaKnown RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 KLF9Q13886 244 aaPredicted RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 SLC22A10Q63ZE4 541 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 MTFR2Q6P444 385 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 KIAA1324Q6UXG2 1013 aaKnown RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 Q6ZSR6 202 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 BTN2A1Q7KYR7 527 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 ZNF687Q8N1G0 1237 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 OR51Q1Q8NH59 317 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 LGALS14Q8TCE9 139 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 RIT1Q92963 219 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 RBM18Q96H35 190 aaKnown RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 RBCK1Q9BYM8 510 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 FAM60AQ9NP50 221 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 A0A087WUJ7 227 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 OR6C68A6NDL8 312 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 SELENOFO60613 162 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 MT-ND4P03905 459 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 SRMP19623 302 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 GPR143P51810 404 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 DYRK1AQ13627 763 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 ZBTB37Q5TC79 503 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 NPSR1Q6W5P4 371 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CMIPQ8IY22 773 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 IZUMO1Q8IYV9 350 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CMTM4Q8IZR5 234 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 OR11H4Q8NGC9 324 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 OR8H1Q8NGG4 311 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 GPBAR1Q8TDU6 330 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 PHYHIPQ92561 330 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 TTC9Q92623 222 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 SPACA7Q96KW9 195 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CMTM3Q96MX0 182 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 CDCA3Q99618 268 aaPredicted RBP13.97□□□□□ -0.17
DDX56-201ENST00000258772 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 NOX4Q9NPH5 578 aa13.97□□□□□ -0.17
DDX56-201ENST00000258772 COL4A2P08572 1712 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 TGFBR3LH3BV60 316 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 ARPC3O15145 178 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 WNT1P04628 370 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms