RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 CMIPQ8IY22 773 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 ARIH2OSQ8N7S6 290 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 VPS37AQ8NEZ2 397 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.15■□□□□ 0.18
KHDC1-201ENST00000257765 CNOT9Q92600 299 aaKnown RBP16.15■□□□□ 0.18
KHDC1-201ENST00000257765 TMEM45BQ96B21 275 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 FBXO17Q96EF6 278 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 PIMREGQ9BSJ6 248 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 CHODLQ9H9P2 273 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 LGALS13Q9UHV8 139 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 OSGIN1Q9UJX0 560 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 MOKQ9UQ07 419 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 PRAMEF27A3QJZ7 478 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 VWC2LB2RUY7 222 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 NDUFS8O00217 210 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 TACR3P29371 465 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 SNRPD2P62316 118 aaKnown RBP16.14■□□□□ 0.17
KHDC1-201ENST00000257765 SWI5Q1ZZU3 235 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 LSRQ86X29 649 aaPredicted RBP16.14■□□□□ 0.17
KHDC1-201ENST00000257765 TESCQ96BS2 214 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 SORCS2Q96PQ0 1159 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 SLC35A5Q9BS91 424 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 C19orf24Q9BVV8 132 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 AKTIPQ9H8T0 292 aa16.14■□□□□ 0.17
KHDC1-201ENST00000257765 ZC3H12DA2A288 527 aaKnown RBP16.13■□□□□ 0.17
KHDC1-201ENST00000257765 HMGN4O00479 90 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 UQCRBP14927 111 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 SLC1A3P43003 542 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 NR4A2P43354 598 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 MAP2K6P52564 334 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 CASP8Q14790 479 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 DPY19L1Q2PZI1 675 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 OTUD3Q5T2D3 398 aaPredicted RBP16.13■□□□□ 0.17
KHDC1-201ENST00000257765 IL17RELQ6ZVW7 336 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 POMGNT2Q8NAT1 580 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 WDR60Q8WVS4 1066 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 OBP2BQ9NPH6 170 aa16.13■□□□□ 0.17
KHDC1-201ENST00000257765 LOC100289279A0A1B0GTE1 492 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 SLC35F4A4IF30 521 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 AGAP5A6NIR3 686 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 FAAHO00519 579 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 C8BP07358 591 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 APEHP13798 732 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 CDH2P19022 906 aaPredicted RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 HNF1AP20823 631 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 ETV4P43268 484 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 CLNS1AP54105 237 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 SYPL1Q16563 259 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 MST1LQ2TV78 715 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 HIKESHIQ53FT3 197 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 SPANXN4Q5MJ08 99 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 FAM120AOSQ5T036 256 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 AAED1Q7RTV5 226 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 ABHD12BQ7Z5M8 362 aaPredicted RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 NUDCD3Q8IVD9 361 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 ZNF781Q8N8C0 355 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 ANKFN1Q8N957 763 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 OR9K2Q8NGE7 335 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 C3orf49Q96BT1 292 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 MSI2Q96DH6 328 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 ZNF385AQ96PM9 386 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 TRNT1Q96Q11 434 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 KCNS3Q9BQ31 491 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 SF3B5Q9BWJ5 86 aaKnown RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 PRR14Q9BWN1 585 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 SLC38A1Q9H2H9 487 aa16.12■□□□□ 0.17
KHDC1-201ENST00000257765 MYOZ1Q9NP98 299 aaPredicted RBP16.12■□□□□ 0.17
KHDC1-201ENST00000257765 CFAP73A6NFT4 308 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 KLF11O14901 512 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 ITM2AO43736 263 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 GPIP06744 558 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 CHRM4P08173 479 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 MYZAPP0CAP1 466 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 CREB1P16220 341 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 EPS8Q12929 822 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 GNA13Q14344 377 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 CARTPTQ16568 116 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 LRRC74BQ6ZQY2 392 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 SLC46A3Q7Z3Q1 461 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 RNF130Q86XS8 419 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 TMEM99Q8N816 258 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 BOD1Q96IK1 185 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 PKNOX2Q96KN3 472 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 SLC38A2Q96QD8 506 aa16.11■□□□□ 0.17
KHDC1-201ENST00000257765 IGHV1-18A0A0C4DH31 117 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 IGHV4-61A0A0C4DH41 118 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 LOC390937A0A1W2PQ73 354 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 LIPT2A6NK58 231 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 AQP7P3A6NL99 342 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 E9PBE3 544 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 HAX1O00165 279 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 TYROBPO43914 113 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 KRT33AO76009 404 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 AKR7A3O95154 331 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 C1QCP02747 245 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 IL7RP16871 459 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 RPS4Y1P22090 263 aaKnown RBP16.1■□□□□ 0.17
KHDC1-201ENST00000257765 S100A3P33764 101 aa16.1■□□□□ 0.17
KHDC1-201ENST00000257765 ANXA11P50995 505 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms