RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ERVMER34-1Q9H9K5 563 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 A0A1W2PQU0 124 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TMEM72A0PK05 275 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 IFNA16P05015 189 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 UBL4AP11441 157 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 HPGDP15428 266 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 BTG1P62324 171 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF85Q03923 595 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TMEM44Q2T9K0 475 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 PCGF3Q3KNV8 242 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 LINC00303Q3SY05 128 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 CD276Q5ZPR3 534 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 IDO2Q6ZQW0 420 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TRILQ7L0X0 811 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SFTPA2Q8IWL1 248 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF676Q8N7Q3 588 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ADAD1Q96M93 576 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 PDCD10Q9BUL8 212 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ZBP1Q9H171 429 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SCP2D1Q9UJQ7 156 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SLC35A3Q9Y2D2 325 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SNRNP200O75643 2136 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 MOSPD3O75425 235 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 KRT33AO76009 404 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 EML2O95834 649 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 CFL1P23528 166 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF77Q15935 545 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 COL28A1Q2UY09 1125 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 GPALPP1Q8IXQ4 340 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 OR51Q1Q8NH59 317 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 S100A16Q96FQ6 103 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ELF4Q99607 663 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TRAF4Q9BUZ4 470 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 HRASLSQ9HDD0 168 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 POLMQ9NP87 494 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 MRPS2Q9Y399 296 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 A0A1B0GWA3 101 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 B3GALT2O43825 422 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 PLGP00747 810 aaPredicted RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF35P13682 527 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 IL9P15248 144 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 CCR9P51686 369 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 SIRPAP78324 504 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 KIAA1324Q6UXG2 1013 aaKnown RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 CD300LDQ6UXZ3 194 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 GRAMD2AQ8IUY3 354 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 RASGRP3Q8IV61 690 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 PELI1Q96FA3 418 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 MS4A4EQ96PG1 132 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 CREBL2O60519 120 aaPredicted RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 GTF2F2P13984 249 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 PRKACAP17612 351 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 THBS2P35442 1172 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 FXYD6P3P58550 94 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ZP1P60852 638 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 RPS15P62841 145 aaKnown RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 GAS6Q14393 721 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 PDGFRLQ15198 375 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 PRRT3Q5FWE3 981 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF627Q7L945 461 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ASPGQ86U10 573 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 SLC35F2Q8IXU6 374 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 LSMEM1Q8N8F7 131 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ZPLD1Q8TCW7 415 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 TSEN15Q8WW01 171 aaKnown RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ST8SIA4Q92187 359 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 SEC22AQ96IW7 307 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 CNN2Q99439 309 aaKnown RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ARHGDIGQ99819 225 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 SOSTQ9BQB4 213 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 MEPEQ9NQ76 525 aaPredicted RBP11.03□□□□□ -0.64
USHBP1-201ENST00000252597 WASH6PQ9NQA3 447 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 MED12Q93074 2177 aa11.03□□□□□ -0.64
USHBP1-201ENST00000252597 C11orf98E9PRG8 122 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 ITPKBP27987 946 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 SORDQ00796 357 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 LEG1Q6P5S2 330 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 ZNF485Q8NCK3 441 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 TTLQ8NG68 377 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 OR6M1Q8NGM8 313 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 OR6N2Q8NGY6 317 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 C19orf43Q9BQ61 176 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 RWDD3Q9Y3V2 267 aa11.02□□□□□ -0.64
USHBP1-201ENST00000252597 TRAV18A0A075B6X5 111 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 ELOA3DA6NLF2 546 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms