RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SLC38A3Q99624 504 aa17.89■□□□□ 0.45
CDC42EP1-201ENST00000249014 PLCL2Q9UPR0 1127 aa17.89■□□□□ 0.45
CDC42EP1-201ENST00000249014 MAU2Q9Y6X3 613 aa17.89■□□□□ 0.45
CDC42EP1-201ENST00000249014 VCANP13611 3396 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 IGHV1OR15-9A0A0B4J2B8 117 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 OR6C68A6NDL8 312 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 OGG1O15527 345 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 OIP5O43482 229 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 NPR2P20594 1047 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 ALAS2P22557 587 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 TCEA1P23193 301 aaKnown RBP17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 MAOBP27338 520 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 HLA-DMAP28067 261 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 INPP1P49441 399 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 CD83Q01151 205 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 GAS6Q14393 721 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 ELOCQ15369 112 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 CD226Q15762 336 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 LYPD4Q6UWN0 246 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 SYT13Q7L8C5 426 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 MS4A15Q8N5U1 240 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 POMGNT2Q8NAT1 580 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 TRMT10AQ8TBZ6 339 aaKnown RBP17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 RNF170Q96K19 258 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 ZNF578Q96N58 590 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 SMAD5Q99717 465 aaKnown RBP17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 GDF15Q99988 308 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 NRIP3Q9NQ35 241 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 SOHLH2Q9NX45 425 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 COPS3Q9UNS2 423 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 ALG5Q9Y673 324 aa17.88■□□□□ 0.45
CDC42EP1-201ENST00000249014 SELENOFO60613 162 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 OR7A10O76100 309 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 CD1CP29017 333 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 CAPZA2P47755 286 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 PPM1FP49593 454 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 GDI2P50395 445 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 CLDN20P56880 219 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 RPS4XP62701 263 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 ERVK-25P63136 954 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 CDK5R1Q15078 307 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 CDONQ4KMG0 1287 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 PRR23CQ6ZRP0 262 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 MED25Q71SY5 747 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 TEX19Q8NA77 164 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 THAP4Q8WY91 577 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 TRIM63Q969Q1 353 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 SMIM19Q96E16 107 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 HDHD2Q9H0R4 259 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 BOLA1Q9Y3E2 137 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 ZNF337Q9Y3M9 751 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 C4orf47A7E2U8 309 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 PPM1BO75688 479 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 NME1P15531 152 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 RAB3BP20337 219 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 RBMS1P29558 406 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 NUDT1P36639 197 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 TALDO1P37837 337 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 DIO1P49895 249 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 AGFG1P52594 562 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 RPS11P62280 158 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 PON3Q15166 354 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 SYS1Q8N2H4 156 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 FAM71CQ8NEG0 241 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 OR14A16Q8NHC5 309 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 MOSPD2Q8NHP6 518 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 ABHD1Q96SE0 405 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 MARVELD1Q9BSK0 173 aa17.87■□□□□ 0.45
CDC42EP1-201ENST00000249014 SPEGQ15772 3267 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 LILRA5A6NI73 299 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 C17orf105B2RV13 164 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ARPC3O15145 178 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 SPI1P17947 270 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 PITPNBP48739 271 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ACTA2P62736 377 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ACTG2P63267 376 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 SIRPAP78324 504 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 MRPS15P82914 257 aaKnown RBP17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 COL19A1Q14993 1142 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 FNDC7Q5VTL7 733 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 CBLN3Q6UW01 205 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 GPR135Q8IZ08 494 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 TSTD1Q8NFU3 115 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 OR5H6Q8NGV6 325 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ZNF524Q96C55 264 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 CLIP3Q96DZ5 547 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 THAP7Q9BT49 309 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 NMNAT2Q9BZQ4 307 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ACOXLQ9NUZ1 547 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 GNG8Q9UK08 70 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 MTCH2Q9Y6C9 303 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 A0A0B4J203 849 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 GBX2P52951 348 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 KCNAB1Q14722 419 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 NKAIN2Q5VXU1 208 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 APOOLQ6UXV4 268 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 ASB18Q6ZVZ8 466 aa17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 PTPMT1Q8WUK0 201 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP1-201ENST00000249014 SNX33Q8WV41 574 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms