RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RFLNBQ8N5W9 214 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 OR1N1Q8NGS0 311 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 SETD6Q8TBK2 473 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 ZNRF4Q8WWF5 429 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 AP3S1Q92572 193 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 DAZLQ92904 295 aaKnown RBP17.48■□□□□ 0.39
YBX3-201ENST00000228251 ART5Q96L15 291 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 PGLYRP3Q96LB9 341 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 ADOQ96SZ5 270 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 TGIF2Q9GZN2 237 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 WWTR1Q9GZV5 400 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 MMP25Q9NPA2 562 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 MRTO4Q9UKD2 239 aaKnown RBP17.48■□□□□ 0.39
YBX3-201ENST00000228251 NOX1Q9Y5S8 564 aa17.48■□□□□ 0.39
YBX3-201ENST00000228251 IGLV3-12A0A075B6K2 115 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 SMIM30A4D0T7 59 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ELOA3DA6NLF2 546 aaPredicted RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 ADAM10O14672 748 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ASAH2BP0C7U1 165 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 EPHA8P29322 1005 aaPredicted RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 UQCRC1P31930 480 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 E2F1Q01094 437 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ZNF117Q03924 483 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 LTBQ06643 244 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 KRR1Q13601 381 aaKnown RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 NSDHLQ15738 373 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ELOA3BQ3SY89 546 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 GXYLT1Q4G148 440 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 C1orf189Q5VU69 101 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 DMKNQ6E0U4 476 aaPredicted RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 FAM122BQ7Z309 247 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 NR2C2APQ86WQ0 139 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 PRR22Q8IZ63 422 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 POMGNT2Q8NAT1 580 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ELOA3Q8NG57 546 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 MOSPD2Q8NHP6 518 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 SMAP2Q8WU79 429 aaPredicted RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 HTRA1Q92743 480 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 KIAA1143Q96AT1 154 aaPredicted RBP17.47■□□□□ 0.39
YBX3-201ENST00000228251 ITPKCQ96DU7 683 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 C4orf36Q96KX1 117 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 IER2Q9BTL4 223 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 NRSN2Q9GZP1 204 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 ST6GALNAC2Q9UJ37 374 aa17.47■□□□□ 0.39
YBX3-201ENST00000228251 CCDC163A0A0D9SF12 145 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 C19orf67A6NJJ6 358 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 CASKO14936 926 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 APEHP13798 732 aaKnown RBP17.46■□□□□ 0.39
YBX3-201ENST00000228251 MTNR1BP49286 362 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 ARRB1P49407 418 aaPredicted RBP17.46■□□□□ 0.39
YBX3-201ENST00000228251 DIO1P49895 249 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 SLC16A1P53985 500 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 OR12D2P58182 307 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 TAS2R43P59537 309 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 PRPS1P60891 318 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 CD300CQ08708 224 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 RHBDD2Q6NTF9 364 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 TMEM71Q6P5X7 295 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 XKRXQ6PP77 449 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 UBALD2Q8IYN6 164 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 EXD3Q8N9H8 876 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 FAM98AQ8NCA5 519 aaKnown RBP17.46■□□□□ 0.39
YBX3-201ENST00000228251 ZPLD1Q8TCW7 415 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 MOGAT1Q96PD6 335 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 DPYSL5Q9BPU6 564 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 PPIL3Q9H2H8 161 aaKnown RBP17.46■□□□□ 0.39
YBX3-201ENST00000228251 CTSFQ9UBX1 484 aa17.46■□□□□ 0.39
YBX3-201ENST00000228251 OR6C68A6NDL8 312 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 OR6C76A6NM76 312 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 ALG1L2C9J202 215 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 IMPA2O14732 288 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 ANKRD34CP0C6C1 535 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 IL7P13232 177 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 HPGDP15428 266 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 CFL1P23528 166 aaKnown RBP17.45■□□□□ 0.38
YBX3-201ENST00000228251 DEFA1P59665 94 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 DEFA3P59666 94 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 IL10RAQ13651 578 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 SLC35D3Q5M8T2 416 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 PXKQ7Z7A4 578 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 SYS1Q8N2H4 156 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 C17orf47Q8NEP4 570 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 ZMYND19Q96E35 227 aaPredicted RBP17.45■□□□□ 0.38
YBX3-201ENST00000228251 GAL3ST4Q96RP7 486 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 OGG1O15527 345 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 SSX4O60224 188 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 TXNDC12O95881 172 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 OR2T7P0C7T2 308 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 TDGF1P13385 188 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 SPI1P17947 270 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 SLC6A8P48029 635 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 PPP3R1P63098 170 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 TRAM1Q15629 374 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 CDONQ4KMG0 1287 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 LINC01590Q5TEZ4 76 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 CCBE1Q6UXH8 406 aaPredicted RBP17.45■□□□□ 0.38
YBX3-201ENST00000228251 LANCL3Q6ZV70 420 aa17.45■□□□□ 0.38
YBX3-201ENST00000228251 NLGN4YQ8NFZ3 816 aaPredicted RBP17.45■□□□□ 0.38
YBX3-201ENST00000228251 OR2T27Q8NH04 317 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms