RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 OSTF1Q92882 214 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PRAP1Q96NZ9 151 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MS4A4EQ96PG1 132 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 CHST6Q9GZX3 395 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 RNF208Q9H0X6 261 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 GLIPR2Q9H4G4 154 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 A0A1W2PPV9 198 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PLPP2O43688 288 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ADCYAP1P18509 176 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MAT2AP31153 395 aaKnown RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 FXYD6P3P58550 94 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ZNF85Q03923 595 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 DUSP2Q05923 314 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ARHGAP19Q14CB8 494 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SMAD2Q15796 467 aaKnown RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 ZNF528Q3MIS6 628 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PLPP4Q5VZY2 271 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ZNF600Q6ZNG1 722 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 OR5K2Q8NHB8 316 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 DIO2Q92813 273 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SLC25A38Q96DW6 304 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 COX14Q96I36 57 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MYO7AQ13402 2215 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 FCMRO60667 390 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 PRAF2O60831 178 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 KRT33AO76009 404 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 LUMP51884 338 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 MLC1Q15049 377 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SWI5Q1ZZU3 235 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 YOD1Q5VVQ6 348 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 TPRA1Q86W33 373 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 AMZ2Q86W34 360 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MUC20Q8N307 709 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 PFN4Q8NHR9 129 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SLC22A8Q8TCC7 542 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 NKX3-1Q99801 234 aaPredicted RBP12.99□□□□□ -0.33
SF1-201ENST00000227503 GPR174Q9BXC1 333 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 BCL2L14Q9BZR8 327 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 TM7SF3Q9NS93 570 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 C20orf141Q9NUB4 165 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 TAS2R5Q9NYW4 299 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SLC13A4Q9UKG4 626 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 SLC27A6Q9Y2P4 619 aa12.99□□□□□ -0.33
SF1-201ENST00000227503 MDC1Q14676 2089 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 IDSB3KWA1 339 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 NDUFS4O43181 175 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 NDUFV2P19404 249 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 NCBP2P52298 156 aaKnown RBP eCLIP12.98□□□□□ -0.332e-7■□□□□ 9.3
SF1-201ENST00000227503 SRSF3P84103 164 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 HNRNPA1L2Q32P51 320 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 MANEAQ5SRI9 462 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 FAM199XQ6PEV8 388 aaPredicted RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 OR6V1Q8N148 313 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 GFI1Q99684 422 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 SLC19A3Q9BZV2 496 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 OR52D1Q9H346 318 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 ANKRD10Q9NXR5 420 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 F5H5P2 479 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 LCMT2O60294 686 aaKnown RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 SC5DO75845 299 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 CEBPBP17676 345 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 HAAOP46952 286 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 STARP49675 285 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 FAM69AQ5T7M9 428 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 GDF7Q7Z4P5 450 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 ADCK2Q7Z695 626 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 KCT2Q8NC54 265 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 C1orf216Q8TAB5 229 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 TNFAIP8L1Q8WVP5 186 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 SYNPO2LQ9H987 977 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 BARX1Q9HBU1 254 aaPredicted RBP12.98□□□□□ -0.33
SF1-201ENST00000227503 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
SF1-201ENST00000227503 SULT1C2O00338 296 aa12.97□□□□□ -0.33
SF1-201ENST00000227503 KIAA0355O15063 1070 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms