RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 IDUAP35475 653 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 CD79BP40259 229 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 NCALDP61601 193 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 SLC35A1P78382 337 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 TLE4Q04727 773 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 LIPEQ05469 1076 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 VEZF1Q14119 521 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 OR7A5Q15622 319 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 NRF1Q16656 503 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ELOA3BQ3SY89 546 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.28□□□□□ -0.6
LSM5-201ENST00000223084 GDF7Q7Z4P5 450 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ARPINQ7Z6K5 226 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 P3H2Q8IVL5 708 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 LSMEM1Q8N8F7 131 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ELOA3Q8NG57 546 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ZHX1-C8orf76Q96EF9 292 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 MCHR1Q99705 422 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ZNF559Q9BR84 538 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 TMEM27Q9HBJ8 222 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 KLHL9Q9P2J3 617 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 PRDM4Q9UKN5 801 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 TRAPPC4Q9Y296 219 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 FBN2P35556 2912 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ELOVL7A1L3X0 281 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 TUBAL3A6NHL2 446 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 LIPT2A6NK58 231 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 CPSF4LA6NMK7 179 aaKnown RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 NPIPB7O75200 414 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 AKR7A3O95154 331 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 C8BP07358 591 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 POU2F1P14859 743 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 EDNRAP25101 427 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 CCKARP32238 428 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 MAP2K6P52564 334 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 PSME3P61289 254 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 EGR4Q05215 589 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 ALG10BQ5I7T1 473 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 C1orf140Q5VVS0 124 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 TFAP2EQ6VUC0 442 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 TMEM99Q8N816 258 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 STK35Q8TDR2 534 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 DNAJA4Q8WW22 397 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 KTI12Q96EK9 354 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 LRRC37BQ96QE4 947 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
LSM5-201ENST00000223084 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 BCO1Q9HAY6 547 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 ADPRHL2Q9NX46 363 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 AKAP6Q13023 2319 aa11.27□□□□□ -0.61
LSM5-201ENST00000223084 IGKV1D-42A0A075B6H8 117 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 A0A0B4J2E0 115 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 A0A1B0GX12 115 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 DNPH1O43598 174 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SHOX2O60902 331 aaPredicted RBP11.26□□□□□ -0.61
LSM5-201ENST00000223084 DCTN3O75935 186 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 AHSA1O95433 338 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 FAM107AO95990 144 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 GPIP06744 558 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SSTR2P30874 369 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 KDELR2P33947 212 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 NTF4P34130 210 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 UGT2B10P36537 528 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 RPS5P46782 204 aaKnown RBP11.26□□□□□ -0.61
LSM5-201ENST00000223084 GSK3BP49841 420 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 CDH12P55289 794 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 H3F3AP84243 136 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SORDQ00796 357 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 CYBRD1Q53TN4 286 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 ENTPD8Q5MY95 495 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 OTUD3Q5T2D3 398 aaPredicted RBP11.26□□□□□ -0.61
LSM5-201ENST00000223084 ANKRD34AQ69YU3 496 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 ULK3Q6PHR2 472 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 CARM1Q86X55 608 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 FAM222BQ8WU58 562 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 PROX1Q92786 737 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SLC25A36Q96CQ1 311 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 C14orf79Q96F83 325 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 NAA11Q9BSU3 229 aaPredicted RBP11.26□□□□□ -0.61
LSM5-201ENST00000223084 PTDSS2Q9BVG9 487 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 EVA1AQ9H8M9 152 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 ELOVL5Q9NYP7 299 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 TAGLN3Q9UI15 199 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 AP3M1Q9Y2T2 418 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms