RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 MAP2K6P52564 334 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 OR7A5Q15622 319 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 ZNF239Q16600 458 aaKnown RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 SWT1Q5T5J6 900 aaKnown RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 GCNT2Q8N0V5 402 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 NAXEQ8NCW5 288 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 MBD3L2Q8NHZ7 208 aaPredicted RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 STK35Q8TDR2 534 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 WNT2BQ93097 391 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 CPNE4Q96A23 557 aaPredicted RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 UCN2Q96RP3 112 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 POTEKPQ9BYX7 375 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 TRIM15Q9C019 465 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 TIGARQ9NQ88 270 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 PAQR5Q9NXK6 330 aaPredicted RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 MCTS1Q9ULC4 181 aaKnown RBP17.72■□□□□ 0.43
HOXA6-201ENST00000222728 ZNF175Q9Y473 711 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 DOPEY1Q5JWR5 2465 aa17.72■□□□□ 0.43
HOXA6-201ENST00000222728 A0A0G2JNJ9 132 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 PMS2P2O95744 297 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 MT-ND1P03886 318 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 RAC3P60763 192 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 LINC00114Q6XXX2 140 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 CCDC71Q8IV32 467 aaPredicted RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 TMEM255BQ8WV15 326 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 RND1Q92730 232 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 TAAR8Q969N4 342 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 UTP4Q969X6 686 aaKnown RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 INTS12Q96CB8 462 aaKnown RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 ZNF300Q96RE9 604 aaPredicted RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 PTDSS2Q9BVG9 487 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 FNDC11Q9BVV2 318 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 POLR2J2Q9GZM3 115 aaKnown RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 POLR2J3Q9H1A7 115 aaKnown RBP17.71■□□□□ 0.43
HOXA6-201ENST00000222728 Q9UFV3 132 aa17.71■□□□□ 0.43
HOXA6-201ENST00000222728 LIPT2A6NK58 231 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 KPNA4O00629 521 aaPredicted RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 PRSS23O95084 383 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 AHSA1O95433 338 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 FPR1P21462 350 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 CBLP22681 906 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 TIMP3P35625 211 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 AGFG1P52594 562 aaKnown RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 PER3P56645 1201 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 CSNK2A1P68400 391 aaPredicted RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 FOXF2Q12947 444 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 IQCCQ4KMZ1 466 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 RIPPLY2Q5TAB7 128 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 MTFR2Q6P444 385 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 TTC33Q6PID6 262 aaPredicted RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 CYP4Z1Q86W10 505 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 SPATA24Q86W54 205 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 ZDHHC21Q8IVQ6 265 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 OFCC1Q8IZS5 231 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 ABHD3Q8WU67 409 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 SLC25A36Q96CQ1 311 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 TM9SF2Q99805 663 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 MMADHCQ9H3L0 296 aaPredicted RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 MAN2C1Q9NTJ4 1040 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 RNF6Q9Y252 685 aa17.7■□□□□ 0.42
HOXA6-201ENST00000222728 FAM32AQ9Y421 112 aaKnown RBP17.7■□□□□ 0.42
HOXA6-201ENST00000222728 ZNF814B7Z6K7 855 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 SMAD9O15198 467 aaKnown RBP17.69■□□□□ 0.42
HOXA6-201ENST00000222728 LDLRP01130 860 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 IL2RAP01589 272 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 FABP3P05413 133 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 CEACAM8P31997 349 aaPredicted RBP17.69■□□□□ 0.42
HOXA6-201ENST00000222728 UGT2B15P54855 530 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 SLC35A1P78382 337 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 ST3GAL3Q11203 375 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 FCRLAQ7L513 359 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 FAM26EQ8N5C1 309 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 SDCCAG3Q96C92 435 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 MPP4Q96JB8 637 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 TMEM43Q9BTV4 400 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 TAPBPLQ9BX59 468 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 TRAPPC4Q9Y296 219 aa17.69■□□□□ 0.42
HOXA6-201ENST00000222728 TRAV36DV7A0A075B6V5 113 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 CLEC18AA5D8T8 446 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 AQP12BA6NM10 295 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 LRRN3E7EW58 273 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 RAMP1O60894 148 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 AKR7A3O95154 331 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 RCBTB2O95199 551 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 GPIP06744 558 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 TMIGD3P0DMS9 266 aaPredicted RBP17.68■□□□□ 0.42
HOXA6-201ENST00000222728 THRBP10828 461 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 FCGR2AP12318 317 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 RHCEP18577 417 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 IFNA8P32881 189 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 LSM11P83369 360 aaKnown RBP eCLIP17.68■□□□□ 0.42
HOXA6-201ENST00000222728 TRAM2Q15035 370 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 CDSNQ15517 529 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 C1orf146Q5VVC0 180 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 CLEC18BQ6UXF7 455 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 CCDC103Q8IW40 242 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 AQP12AQ8IXF9 295 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 ADGRG5Q8IZF4 528 aa17.68■□□□□ 0.42
HOXA6-201ENST00000222728 C10orf53Q8N6V4 93 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms