RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CCR9P51686 369 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ARHGAP11BQ3KRB8 267 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ANKRD33Q7Z3H0 272 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 SPRED2Q7Z698 418 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 CCDC36Q8IYA8 594 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 OR4E2Q8NGC2 313 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 OR2T4Q8NH00 348 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 OR52I2Q8NH67 350 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 SMIM4Q8WVI0 70 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ELMOD3Q96FG2 381 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 HRASLSQ9HDD0 168 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ZNF69Q9UC07 566 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ST6GALNAC2Q9UJ37 374 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 PRELID3BQ9Y3B1 194 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ADAM11O75078 769 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 EPCAMP16422 314 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 UGT2B7P16662 529 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 NT5EP21589 574 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 PEBP1P30086 187 aaKnown RBP9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 RAD52P43351 418 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 GBX2P52951 348 aaPredicted RBP9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 DUSP8Q13202 625 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ZNF273Q14593 569 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 AMZ1Q400G9 498 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 DEFB134Q4QY38 66 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 HSD17B12Q53GQ0 312 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 TMEFF1Q8IYR6 380 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 COX18Q8N8Q8 333 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 OR11G2Q8NGC1 345 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 OR4K14Q8NGD5 310 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 HAVCR2Q8TDQ0 301 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 RSPRY1Q96DX4 576 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 SFXN2Q96NB2 322 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 C7orf50Q9BRJ6 194 aaKnown RBP9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 MEPEQ9NQ76 525 aaPredicted RBP9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 KLK11Q9UBX7 282 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 TRBV23OR9-2A0A075B6M9 112 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ACOD1A6NK06 481 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 G3V3Q6 166 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 TEX46H3BTG2 121 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 PSMB1P20618 241 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 CMPK1P30085 196 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ARFIP1P53367 373 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 S100A12P80511 92 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 DYRK1AQ13627 763 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 APOOLQ6UXV4 268 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 RNF113BQ8IZP6 322 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SHISA5Q8N114 240 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ZNF619Q8N2I2 560 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 MEIOBQ8N635 442 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 PELI1Q96FA3 418 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 PTCHD1Q96NR3 888 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SLC6A15Q9H2J7 730 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 PFDN2Q9UHV9 154 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 KCNE5Q9UJ90 142 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 INSL6Q9Y581 213 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 TBC1D3EA0A087X179 549 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 TRAV1-2A0A0B4J238 106 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 L7N2F9 121 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 FGF19O95750 216 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 AGR2O95994 175 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 RAG2P55895 527 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 CDK5R1Q15078 307 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 DCST2Q5T1A1 773 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ZC3H14Q6PJT7 736 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 FCRLAQ7L513 359 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 C7orf61Q8IZ16 206 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 C10orf90Q96M02 699 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 NOX4Q9NPH5 578 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 KCMF1Q9P0J7 381 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 BAIAP2Q9UQB8 552 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SLC27A6Q9Y2P4 619 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 DNAH14Q0VDD8 3507 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 KHNYNO15037 678 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 LDB3O75112 727 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 DBIP07108 87 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ACSM4P0C7M7 580 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 RAB3AP20336 220 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 MAOBP27338 520 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 GRPRP30550 384 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 MAT2AP31153 395 aaKnown RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ACTC1P68032 377 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 ACTA1P68133 377 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SIRPAP78324 504 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 IRF4Q15306 451 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 MFSD9Q8NBP5 474 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 UXS1Q8NBZ7 420 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 MOSPD2Q8NHP6 518 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 SMIM19Q96E16 107 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 BCL2L14Q9BZR8 327 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 TMEM27Q9HBJ8 222 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 CA10Q9NS85 328 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 POT1Q9NUX5 634 aa9.69□□□□□ -0.86
CX3CL1-201ENST00000006053 POMT2Q9UKY4 750 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms