RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 RIT1Q92963 219 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 RAB7BQ96AH8 199 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 NMNAT3Q96T66 252 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 STARD5Q9NSY2 213 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 ZNF69Q9UC07 566 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 RPP14O95059 124 aaKnown RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 UCHL1P09936 223 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 PVRP15151 417 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 PLA2G7Q13093 441 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 SLC35F2Q8IXU6 374 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 TEX19Q8NA77 164 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 DNAAF1Q8NEP3 725 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 OR10G6Q8NH81 332 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 TSPAN10Q9H1Z9 355 aaPredicted RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 NRIP3Q9NQ35 241 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 KHNYNO15037 678 aaKnown RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 ARL6IP5O75915 188 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 ATP1B1P05026 303 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 TMIGD3P0DMS9 266 aaPredicted RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 MAP2K6P52564 334 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 NANOS3P60323 173 aaKnown RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 SGCGQ13326 291 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 DEFB115Q30KQ5 88 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 FHL5Q5TD97 284 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 OR5M10Q6IEU7 315 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 CMIPQ8IY22 773 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 RBPMSQ93062 196 aaKnown RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 MARVELD3Q96A59 401 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 CXorf58Q96LI9 332 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 LINC00052Q96N35 136 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 NOX3Q9HBY0 568 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 NTMQ9P121 344 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 NCDNQ9UBB6 729 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 C19orf53Q9UNZ5 99 aaPredicted RBP12.9□□□□□ -0.35
USH1C-201ENST00000005226 PCDHGA5Q9Y5G8 931 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 STON1Q9Y6Q2 735 aa12.9□□□□□ -0.35
USH1C-201ENST00000005226 A0A1B0GTH9 108 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 A0A1W2PQU0 124 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 LGALS8O00214 317 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 PRKNO60260 465 aaPredicted RBP12.89□□□□□ -0.35
USH1C-201ENST00000005226 AGR2O95994 175 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
USH1C-201ENST00000005226 SOX2P48431 317 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 HYAL4Q2M3T9 481 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 LINC00303Q3SY05 128 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 OR14C36Q8NHC7 312 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 MOSPD2Q8NHP6 518 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 RAB11FIP5Q9BXF6 653 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 GSTZ1O43708 216 aaPredicted RBP12.89□□□□□ -0.35
USH1C-201ENST00000005226 PTGS2P35354 604 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 IGFALSP35858 605 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
USH1C-201ENST00000005226 SEC13P55735 322 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 KIAA1024LP59773 190 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 DYRK1AQ13627 763 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 FAM53BQ14153 422 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 NNATQ16517 81 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 ALG10BQ5I7T1 473 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 UBE2NLQ5JXB2 153 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 RASD2Q96D21 266 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 TSSK2Q96PF2 358 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 ZCCHC4Q9H5U6 513 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 LIN7BQ9HAP6 207 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 PTTG3PQ9NZH4 202 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 POMT2Q9UKY4 750 aa12.89□□□□□ -0.35
USH1C-201ENST00000005226 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
USH1C-201ENST00000005226 B3GALT2O43825 422 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 FKTNO75072 461 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 SERPINA3P01011 423 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 SLC35G6P0C7Q6 338 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ADH7P40394 386 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ACTC1P68032 377 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ACTA1P68133 377 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 OTPQ5XKR4 325 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 KIAA1324Q6UXG2 1013 aaKnown RBP12.88□□□□□ -0.35
USH1C-201ENST00000005226 USP53Q70EK8 1073 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 SLITRK4Q8IW52 837 aa12.88□□□□□ -0.35
USH1C-201ENST00000005226 ZNF511Q8NB15 262 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms