RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gatad2bQ8VHR5 594 aaKnown RBP11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Egln3Q91UZ4 239 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Col26a1Q91VF6 440 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Smarcd2Q99JR8 531 aaKnown RBP11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 4930503E14RikQ9D583 177 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Med11Q9D8C6 117 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Alg5Q9DB25 324 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Sertad3Q9ERC3 197 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Syt8Q9R0N6 395 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Coro1bQ9WUM3 484 aaKnown RBP11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc7a7Q9Z1K8 510 aa11.96□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cyp4a32A2A8T1 509 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Zfp54E9PW05 585 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 CatsperdE9Q9F6 805 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Zfp619G3X9T2 1161 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 UoxP25688 303 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Zdhhc2P59267 366 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Crmp1P97427 572 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Glycam1Q02596 151 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Serpina3mQ03734 418 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Khdc4Q3TCX3 612 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm45902Q3UDN3 361 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Timd4Q6U7R4 343 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Znf770Q8BIQ8 705 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Pamr1Q8BU25 720 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Cep68Q8C0D9 733 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Csnka2ipQ8CH19 720 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Rab38Q8QZZ8 211 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr98Q8VFD9 309 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Wdr45Q91VM3 360 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Mat1aQ91X83 396 aaKnown RBP11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Med31Q9CXU1 131 aaKnown RBP11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Rab3bQ9CZT8 219 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 DlstQ9D2G2 454 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Lman2Q9DBH5 358 aaKnown RBP11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Cyp2d22Q9JKY7 500 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Cdh20Q9Z0M3 801 aa11.96□□□□□ -0.5
Nup88-203ENSMUST00000108531 Slc37a4A0A1L1SUI3 450 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Glb1l3A2RSQ1 649 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Vmn2r110E9PWD5 858 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr655E9Q252 308 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Dok2O70469 412 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Actc1P68033 377 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Acta1P68134 377 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Lingo2Q3URE9 606 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Ankrd53Q3V0J4 497 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Q5SPV6 233 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Serinc4Q5XK03 492 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Klhl6Q6V595 619 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Q8BHB7 409 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Stfa2l1Q8BWM3 103 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 TigarQ8BZA9 269 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Flywch1Q8CI03 673 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Slc31a1Q8K211 196 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Dlgap5Q8K4R9 808 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Tctn3Q8R2Q6 595 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Clec2dQ91V08 207 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 LipfQ9CPP7 395 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 P2ry12Q9CPV9 347 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Mgat4cQ9D306 478 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Prss52Q9D9M0 321 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Prl8a1Q9DAV8 240 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Herpud2Q9JJC9 404 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fgf21Q9JJN1 210 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr1314A2AVL6 312 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Morn1A2RTS7 477 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Chrna10B2RX82 447 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fbxw24E9PXM9 466 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 IghgP01863 330 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Tmco2P0C1V4 183 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Capza2P47754 286 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Msto1Q2YDW2 556 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Xrcc1Q60596 631 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 BpiQ67E05 483 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fbxo5Q7TSG3 421 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 B130006D01RikQ8BRH6 153 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Ankmy1Q8C0W1 906 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm11541Q8C4D8 108 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Grhl2Q8K5C0 625 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Mboat2Q8R3I2 519 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr97Q8VFE1 310 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr781Q8VFZ8 311 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Lamtor1Q9CQ22 161 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Prelid3bQ9CYY7 195 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Dcbld1Q9D4J3 503 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Dennd6bQ9D9V7 585 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Pkmyt1Q9ESG9 490 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fzd2Q9JIP6 570 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fbxw5Q9QXW2 573 aa11.95□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm42715A0A087WP63 3095 aaKnown RBP11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Irs2P81122 1321 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 4930433I11RikA0A0U1RPT6 723 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm17949A0A1B0GRV7 212 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Fam84bD3YXJ5 310 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Vmn2r113E9PZA6 856 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm20518E9Q548 580 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Gm11397F6V5V4 377 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Esp36G3UZD8 160 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Olfr1425K7N659 312 aa11.94□□□□□ -0.5
Nup88-203ENSMUST00000108531 Papss2O88428 621 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms