RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 NRF1Q16656 503 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 EEF1A1P5Q5VTE0 462 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 FAM91A1Q658Y4 838 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 ZNF474Q6S9Z5 364 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-231ENST00000640499 FCRLAQ7L513 359 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 LUZP2Q86TE4 346 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 MARVELD3Q96A59 401 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 OPN3Q9H1Y3 402 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-231ENST00000640499 PACSIN3Q9UKS6 424 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 HDGFL3Q9Y3E1 203 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 SPIN1Q9Y657 262 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-231ENST00000640499 FBN2P35556 2912 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 SULT2B1O00204 365 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 PMS2P2O95744 297 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 COX6B1P14854 86 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 LIPEQ05469 1076 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 INTS11Q5TA45 600 aaKnown RBP23.8■■□□□ 1.4
VEGFA-231ENST00000640499 ERICH5Q6P6B1 374 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 RBM45Q8IUH3 476 aaKnown RBP23.8■■□□□ 1.4
VEGFA-231ENST00000640499 MICU2Q8IYU8 434 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 BHLHE22Q8NFJ8 381 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-231ENST00000640499 OR2T12Q8NG77 320 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 LRRC37BQ96QE4 947 aa23.8■■□□□ 1.4
VEGFA-231ENST00000640499 CACNA1DQ01668 2161 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 ITPR2Q14571 2701 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 A0A1B0GWA3 101 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 MSTNO14793 375 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 NPIPB7O75200 414 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 FESP07332 822 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 C8BP07358 591 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 UQCRC1P31930 480 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 MAP2K6P52564 334 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 C6orf89Q6UWU4 347 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 ARPINQ7Z6K5 226 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 TSPYL5Q86VY4 417 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-231ENST00000640499 TUSC5Q8IXB3 177 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 FITM2Q8N6M3 262 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 ZNF610Q8N9Z0 462 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 OR52E4Q8NGH9 312 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 OR6T1Q8NGN1 323 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 POTEKPQ9BYX7 375 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 PLSCR4Q9NRQ2 329 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 GLRX2Q9NS18 164 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 TMEM181Q9P2C4 612 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 ABCD2Q9UBJ2 740 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 TRAPPC4Q9Y296 219 aa23.79■■□□□ 1.4
VEGFA-231ENST00000640499 CYTIPO60759 359 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 RAMP1O60894 148 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 CD8BP10966 210 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 CXCR1P25024 350 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 AGTR1P30556 359 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 RGS8P57771 180 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-231ENST00000640499 PSME3P61289 254 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 H3F3AP84243 136 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 EGR4Q05215 589 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 NUFIP2Q7Z417 695 aaKnown RBP23.78■■□□□ 1.4
VEGFA-231ENST00000640499 DDIT4LQ96D03 193 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 PSD2Q9BQI7 771 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 GALNT8Q9NY28 637 aa23.78■■□□□ 1.4
VEGFA-231ENST00000640499 TESQ9UGI8 421 aaKnown RBP23.78■■□□□ 1.4
VEGFA-231ENST00000640499 ELOVL7A1L3X0 281 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 DCTN3O75935 186 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 SMNDC1O75940 238 aaKnown RBP eCLIP23.77■■□□□ 1.44e-7■■□□□ 12.8
VEGFA-231ENST00000640499 PRKD3O94806 890 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 KDELR2P33947 212 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 GSK3BP49841 420 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 CSNK2A1P68400 391 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-231ENST00000640499 RNPS1Q15287 305 aaKnown RBP23.77■■□□□ 1.4
VEGFA-231ENST00000640499 OR1Q1Q15612 314 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 CCDC103Q8IW40 242 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 OR6K3Q8NGY3 331 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 ZNF559Q9BR84 538 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 RBM24Q9BX46 236 aaKnown RBP23.77■■□□□ 1.4
VEGFA-231ENST00000640499 TRIM2Q9C040 744 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 KLHL28Q9NXS3 571 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 KLHL13Q9P2N7 655 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 AP3M1Q9Y2T2 418 aa23.77■■□□□ 1.4
VEGFA-231ENST00000640499 IGKV1D-42A0A075B6H8 117 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 A8MVM7 634 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 PLGP00747 810 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-231ENST00000640499 THY1P04216 161 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 FPR1P21462 350 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 OR2B6P58173 313 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 GKAP1Q5VSY0 366 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-231ENST00000640499 GTF2IRD2BQ6EKJ0 949 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 ABLIM2Q6H8Q1 611 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 GTF2IRD2Q86UP8 949 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 SLC43A2Q8N370 569 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 ZNF300Q96RE9 604 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-231ENST00000640499 EVA1AQ9H8M9 152 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 BCO1Q9HAY6 547 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 C12orf10Q9HB07 376 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 TAGLN3Q9UI15 199 aa23.76■■□□□ 1.39
VEGFA-231ENST00000640499 FREM1Q5H8C1 2179 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 A0A0B4J2E0 115 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 A0A1B0GX12 115 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 LIPT2A6NK58 231 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 ZNF716A6NP11 495 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 LYPD3O95274 346 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 TNFRSF1BP20333 461 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms