RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RHCGQ9UBD6 479 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 A4GNTQ9UNA3 340 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 IGKV1D-42A0A075B6H8 117 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 A0A087WUJ7 227 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 IGHV3-15A0A0B4J1V0 119 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 TRAPPC13A5PLN9 417 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 CD8B2A6NJW9 211 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 A8MVM7 634 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 hCG_2039718K7EN88 272 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 SULT2B1O00204 365 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 CHP2O43745 196 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 NPIPB7O75200 414 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 AQP8O94778 261 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 RNF224P0DH78 156 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 IMPDH2P12268 514 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 KLK2P20151 261 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 DIO1P49895 249 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 TAS2R41P59536 307 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 VLDLRP98155 873 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 TRAP1Q12931 704 aaKnown RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 SF3B4Q15427 424 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■■■ 32.9
GTF3A-209ENST00000640289 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 ASRGL1Q7L266 308 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 GDF7Q7Z4P5 450 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 NKAIN4Q8IVV8 208 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 NAXEQ8NCW5 288 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
GTF3A-209ENST00000640289 ROBO4Q8WZ75 1007 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 C7orf34Q96L11 122 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 PRRC1Q96M27 445 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 UCN2Q96RP3 112 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 SLC7A8Q9UHI5 535 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 POMPQ9Y244 141 aa11.83□□□□□ -0.52
GTF3A-209ENST00000640289 RELNP78509 3460 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 A0A0G2JNJ9 132 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 SLC22A20A6NK97 555 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 FFAR1O14842 300 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ZG16O60844 167 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 DIRAS1O95057 198 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 AGFG2O95081 481 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 OR5F1O95221 314 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 PNMTP11086 282 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ENPP1P22413 925 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 CLK1P49759 484 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ERFP50548 548 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 MAP2K6P52564 334 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 MTX3Q5HYI7 312 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 SWT1Q5T5J6 900 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 C1orf140Q5VVS0 124 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 LINC00114Q6XXX2 140 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ZGRF1Q86YA3 2104 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 CCDC71Q8IV32 467 aaPredicted RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 GCNT2Q8N0V5 402 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 STK35Q8TDR2 534 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 WNT2BQ93097 391 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 CPNE4Q96A23 557 aaPredicted RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 KTI12Q96EK9 354 aaPredicted RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 LRGUKQ96M69 825 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 SEPHS2Q99611 448 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 PTDSS2Q9BVG9 487 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 POTEKPQ9BYX7 375 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 POLR2J2Q9GZM3 115 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 POLR2J3Q9H1A7 115 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 Q9UFV3 132 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 RIMS3Q9UJD0 308 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
GTF3A-209ENST00000640289 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ZNF175Q9Y473 711 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 ENPP4Q9Y6X5 453 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 DNAJC13O75165 2243 aa11.82□□□□□ -0.52
GTF3A-209ENST00000640289 CLEC18AA5D8T8 446 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 SYNGR4O95473 234 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 STAMBPO95630 424 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 PMS2P2O95744 297 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 LDLRP01130 860 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 IDUAP35475 653 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 TIMP3P35625 211 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 RPS5P46782 204 aaKnown RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 OR2B6P58173 313 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 RAC3P60763 192 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 CSNK2A1P68400 391 aaPredicted RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
GTF3A-209ENST00000640289 FOXF2Q12947 444 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 FLOT2Q14254 428 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 OR7A5Q15622 319 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 IQCCQ4KMZ1 466 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 RIPPLY2Q5TAB7 128 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 CLEC18BQ6UXF7 455 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 FAM26EQ8N5C1 309 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 CLEC18CQ8NCF0 446 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
GTF3A-209ENST00000640289 RND1Q92730 232 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms