RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SPATA22Q8NHS9 363 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 DNASE2BQ8WZ79 361 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ZNF514Q96K75 400 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 C10orf90Q96M02 699 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 AIFM2Q9BRQ8 373 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ANGPTL4Q9BY76 406 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CCNB1IP1Q9NPC3 277 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OLFML3Q9NRN5 406 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 MED17Q9NVC6 651 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CYTH4Q9UIA0 394 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ATPIF1Q9UII2 106 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 EXOGQ9Y2C4 368 aaKnown RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ANKRD11Q6UB99 2663 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-220ENST00000639841 IGHV1OR15-9A0A0B4J2B8 117 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 TEX13DA0A0J9YY54 714 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-220ENST00000639841 PATE3B3GLJ2 98 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 TIMM23O14925 209 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 PEX1O43933 1283 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 BMP10O95393 424 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 GSTA2P09210 222 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 MBL2P11226 248 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-220ENST00000639841 ACADSP16219 412 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 MMP11P24347 488 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CD40LGP29965 261 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CRYBB2P43320 205 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 SLC7A2P52569 658 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CX3CL1P78423 397 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CHI3L2Q15782 390 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 RNLSQ5VYX0 342 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 TMEM64Q6YI46 380 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 RD3Q7Z3Z2 195 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 LIMS2Q7Z4I7 341 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 ACOT1Q86TX2 421 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 DCUN1D3Q8IWE4 304 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 TMEM104Q8NE00 496 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 OR8J2Q8NGG1 315 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 THAP6Q8TBB0 222 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 ASB10Q8WXI3 467 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 WBP1Q96G27 269 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 KRTAP4-12Q9BQ66 201 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 PARD6GQ9BYG4 376 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-220ENST00000639841 SEMA4CQ9C0C4 833 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 MIS12Q9H081 205 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CXXC4Q9H2H0 198 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 STARD5Q9NSY2 213 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 RBAKQ9NYW8 714 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-220ENST00000639841 RNF6Q9Y252 685 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 TNFRSF18Q9Y5U5 241 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 CPQQ9Y646 472 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 KPTNQ9Y664 436 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 SCN1AP35498 2009 aa6.5□□□□□ -1.37
NECAP1-220ENST00000639841 C1orf232A0A0U1RR37 186 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 A8MXQ7 604 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TULP2O00295 520 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 IMPA2O14732 288 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 SH3BGRLO75368 114 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PRKRAO75569 313 aaKnown RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 RBBP9O75884 186 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 IGLV3-19P01714 112 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 CT62P0C5K7 136 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 SPINK2P20155 84 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PPP1R2P41236 205 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 UQCRFS1P47985 274 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 ACOT2P49753 483 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 SGSHP51688 502 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 UBE2G2P60604 165 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 DSTNP60981 165 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TSPAN5P62079 268 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TFAMQ00059 246 aaKnown RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 DR1Q01658 176 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 OC90Q02509 493 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TRAP1Q12931 704 aaKnown RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 MEF2DQ14814 521 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PHKG1Q16816 387 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 LGSNQ5TDP6 509 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PPP1R2P3Q6NXS1 205 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 C19orf35Q6ZS72 473 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 MRPL21Q7Z2W9 205 aaKnown RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 LMNTD1Q8N9Z9 388 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TANKQ92844 425 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 MYLPFQ96A32 169 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 IL4I1Q96RQ9 567 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 GPN2Q9H9Y4 310 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 SPHK2Q9NRA0 654 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 MBD2Q9UBB5 411 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 STARD10Q9Y365 291 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 TSC22D4Q9Y3Q8 395 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 RAI2Q9Y5P3 530 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 FRYLO94915 3013 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 ASCC3Q8N3C0 2202 aaKnown RBP6.49□□□□□ -1.37
NECAP1-220ENST00000639841 A0A1W2PPV9 198 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 RAB19A4D1S5 217 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PRSS37A4D1T9 235 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 LRCH4O75427 683 aa6.49□□□□□ -1.37
NECAP1-220ENST00000639841 ZBTB11O95625 1053 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms