RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 TRAPPC2P0DI81 140 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 TRAPPC2BP0DI82 140 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 CT45A8P0DMV1 189 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 CT45A9P0DMV2 189 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 RPL4P36578 427 aaKnown RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 RBM34P42696 430 aaKnown RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 SF3A2Q15428 464 aaKnown RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 CT45A2Q5DJT8 189 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 ULK3Q6PHR2 472 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 LYPD4Q6UWN0 246 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 ZNF550Q7Z398 422 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 C16orf52Q8NHV5 167 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 ZPLD1Q8TCW7 415 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 GHSRQ92847 366 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 SGTBQ96EQ0 304 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 MMABQ96EY8 250 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 SNX18Q96RF0 628 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 MKKSQ9NPJ1 570 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 PAQR5Q9NXK6 330 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-216ENST00000639167 CHRNA9Q9UGM1 479 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 ST6GALNAC2Q9UJ37 374 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 CLDN16Q9Y5I7 305 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 USP34Q70CQ2 3546 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 COL4A2P08572 1712 aa9.74□□□□□ -0.85
NECAP1-216ENST00000639167 A0A0B4J203 849 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 A0A0G2JK05 382 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 PRAMEF2O60811 474 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 IFI6P09912 130 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TFPIP10646 304 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ENPP1P22413 925 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 PTBP1P26599 531 aaKnown RBP eCLIP9.73□□□□□ -0.858e-7■■■■■ 27.6
NECAP1-216ENST00000639167 ATP12AP54707 1039 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TAS2R43P59537 309 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 RIN1Q13671 783 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ZNF141Q15928 474 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 RNASE12Q5GAN4 147 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 GPR135Q8IZ08 494 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 BCORP1Q8N888 145 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TRMT10AQ8TBZ6 339 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 CLIP3Q96DZ5 547 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 KLHDC7BQ96G42 594 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 GFM1Q96RP9 751 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 NMNAT3Q96T66 252 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 KCNJ15Q99712 375 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TPSD1Q9BZJ3 242 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 OR10A5Q9H207 317 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TRPV5Q9NQA5 729 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 HAO2Q9NYQ3 351 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 MRPS33Q9Y291 106 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TMEM184BQ9Y519 407 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 SERINC4A6NH21 518 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 C4orf47A7E2U8 309 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 C10orf142B7Z368 130 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 NPIPB9F8W1W9 429 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 RGS13O14921 159 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ALAS2P22557 587 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 MAOBP27338 520 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TALDO1P37837 337 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 PSMB10P40306 273 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 TSPAN7P41732 249 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 GPR3P46089 330 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 CCR5P51681 352 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 AGFG1P52594 562 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 NRG3P56975 720 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ACTC1P68032 377 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ACTA1P68133 377 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 DMKNQ6E0U4 476 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 LRRC28Q86X40 367 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 DUSP18Q8NEJ0 188 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 OR5H6Q8NGV6 325 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 ZC3HAV1LQ96H79 300 aaKnown RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 RNF170Q96K19 258 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 CYSLTR2Q9NS75 346 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 DCAF16Q9NXF7 216 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 WSB2Q9NYS7 404 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-216ENST00000639167 SERTAD3Q9UJW9 196 aa9.73□□□□□ -0.85
NECAP1-216ENST00000639167 HEATR5AQ86XA9 2040 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 OR6C70A6NIJ9 312 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 FAM171A2A8MVW0 826 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 PSMD9O00233 223 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 EEF1E1O43324 174 aaKnown RBP9.72□□□□□ -0.85
NECAP1-216ENST00000639167 SELENOFO60613 162 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 SC5DO75845 299 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 RAB3BP20337 219 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 HLA-DMAP28067 261 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-216ENST00000639167 GDI2P50395 445 aaKnown RBP9.72□□□□□ -0.85
NECAP1-216ENST00000639167 CCR4P51679 360 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 CLDN20P56880 219 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 ERVK-25P63136 954 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 GPR176Q14439 515 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 TRAM1Q15629 374 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 PXKQ7Z7A4 578 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 NOXA1Q86UR1 476 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 SLC35F2Q8IXU6 374 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 ZNF595Q8IYB9 648 aa9.72□□□□□ -0.85
NECAP1-216ENST00000639167 DNAJC5GQ8N7S2 189 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms