RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	MT-ND4L	P03901	98 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	RLN1	P04808	185 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	CLTB	P09497	229 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SBK2	P0C263	348 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ACHE	P22303	614 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	DPP4	P27487	766 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	CSF2RB	P32927	897 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	RAB5C	P51148	216 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	CDK5R1	Q15078	307 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SYPL1	Q16563	259 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	UAP1L1	Q3KQV9	507 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SDHAF4	Q5VUM1	108 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	C11orf87	Q6NUJ2	197 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	PLBD1	Q6P4A8	553 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	DRAM2	Q6UX65	266 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	TMEM64	Q6YI46	380 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ESPNL	Q6ZVH7	1005 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	NAA40	Q86UY6	237 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ZSCAN1	Q8NBB4	408 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SFXN5	Q8TD22	340 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	WDR89	Q96FK6	387 aa	Predicted RBP	12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	UBQLN3	Q9H347	655 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	TUBA4B	Q9H853	241 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ASF1B	Q9NVP2	202 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	MTFP1	Q9UDX5	166 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ST6GALNAC2	Q9UJ37	374 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	ZMIZ1	Q9ULJ6	1067 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	SLC22A7	Q9Y694	548 aa		12.09	□□□□□ -0.47
PCCA-215	ENST00000637657	CXorf51A	A0A1B0GTR3	108 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	DBX1	A6NMT0	343 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	BLOC1S5-TXNDC5	H3BN57	136 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657		J3QLW9	94 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	SH3BGRL	O75368	114 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	IGSF6	O95976	241 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	POMC	P01189	267 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	OR4Q2	P0C623	313 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	AKAIN1	P0CW23	69 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	TPT1	P13693	172 aa	Known RBP	12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	ZNF19	P17023	458 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	BMP7	P18075	431 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	AHR	P35869	848 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	CD81	P60033	236 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	RAB2A	P61019	212 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	PPP2CB	P62714	309 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	PPP2CA	P67775	309 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	DNLZ	Q5SXM8	178 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	SLC6A19	Q695T7	634 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	C17orf47	Q8NEP4	570 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	NLGN2	Q8NFZ4	835 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	GTF3A	Q92664	365 aa	Known RBP	12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	SLC25A38	Q96DW6	304 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	WFDC6	Q9BQY6	131 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	UQCC1	Q9NVA1	299 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	POMT1	Q9Y6A1	747 aa		12.08	□□□□□ -0.47
PCCA-215	ENST00000637657	DOCK6	Q96HP0	2047 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	TRIP12	Q14669	1992 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	TRAV14DV4	A0A0A6YYC5	116 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	GXYLT2	A0PJZ3	443 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	NPIPB9	F8W1W9	429 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	NPC1	O15118	1278 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	LILRB5	O75023	590 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	DNAJB6	O75190	326 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	SLC25A12	O75746	678 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	RCBTB2	O95199	551 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	TGFB1	P01137	390 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	CD79A	P11912	226 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	AGA	P20933	346 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	GRK4	P32298	578 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	RGS8	P57771	180 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	PNLIPRP3	Q17RR3	467 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	LNX2	Q8N448	690 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	OR52B4	Q8NGK2	314 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	OR5M8	Q8NGP6	311 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	RNASE11	Q8TAA1	199 aa	Known RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	PHOSPHO1	Q8TCT1	267 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	XAGE5	Q8WWM1	108 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	EDARADD	Q8WWZ3	215 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	KISS1R	Q969F8	398 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	CPNE4	Q96A23	557 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	VRK1	Q99986	396 aa	Predicted RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	RIOK2	Q9BVS4	552 aa	Known RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	QRSL1	Q9H0R6	528 aa	Known RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	SLITRK2	Q9H156	845 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	XKR8	Q9H6D3	395 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	CCDC86	Q9H6F5	360 aa	Known RBP	12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	CMC2	Q9NRP2	79 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	FBXL4	Q9UKA2	621 aa		12.08	□□□□□ -0.48
PCCA-215	ENST00000637657	OR5H14	A6NHG9	310 aa		12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	SEPT4	O43236	478 aa		12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	CTNS	O60931	367 aa		12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	NDUFS6	O75380	124 aa	Known RBP	12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	KLHL18	O94889	574 aa		12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	SLC16A8	O95907	504 aa		12.07	□□□□□ -0.48
PCCA-215	ENST00000637657	GBA	P04062	536 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms